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Plant Program
… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … and environmental sustainability. … Plant Flagship Genomes are selected through discussion with the JGI Plant … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … is a five-year project to sequence 1000 fungal genomes from across the Fungal Tree of Life, from an international …
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FICUS
… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS call with EMSL begin with a Letter of Intent (LOI) from a researcher, briefly describing the project …
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Institutional User Agreements
… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … and delays on the work. The transfer of a proposal from one commercial institution to a new commercial …
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Frequently Asked Questions: Project Management
Christa Pennacchio   … You can visit the Products & Offerings section of our website for more details, including … IMG (citation: https://doi.org/10.1093/nar/gkaa939 ) Metagenomes and Single Cells: IMG/M   (citation: … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … …
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User Support
The JGI Project Management Office carries out a number of activities to facilitate … specific milestones, either by automated emails or emails from your Project Manager. Your Project Manager will also … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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How to Submit Sequencing Samples
Below is a brief description of the process needed to prepare and ship samples for … QC Protocol DNA Extraction 101 : tips, kits, and protocols (from PacBio) Guidance for sample collection and storage … Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? …
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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …
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Natural Prodcast Episode 14: Nigel Mouncey
… … DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from here I can get back to a regular schedule. I’m going to … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Natural Prodcast Episode 8: Eric Schmidt
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … week, we have our conversation with Professor Eric Schmidt, from the University of Utah. I’ve known Eric for a long time … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …
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Prokaryote Program User Advisory Committee
The Prokaryote Advisory Committee is chartered to offer advice, … key external advisory panels and advocates of Program strategy, operations, and scientific relevance and quality. …
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Natural Prodcast Episode 23: Aaron Puri
… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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