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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … Then you have to maybe improve some of your bioinformatic analysis. You don’t want to get clusters that are encoding … there is one Cryptosporidium that has one of the biggest polyketide synthases found in microbes. It’s an obligate …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … explored to predict microbial lifestyles using AI-driven analysis of such datasets. The program also collaborates …
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Phylogenomic analysis of polyketide synthase-encoding genes in Trichoderma
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Data Policy
… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … data. The JGI Data Policy applies to research data and analysis products (referred to as “data” for the remainder … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct … Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which …
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Industry Engagement Program
… joined the JGI in 2017, he brought with him 20 years of industry experience — and an opportunity to expand the … including User Facilities like the JGI, through its Genesis Mission. Launched in 2025, the initiative aims to … and environmental samples by using advanced computer analysis coupled with liquid chromatography mass …
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Microbiome Data Science Team
… Biology is currently experiencing a revolution brought on by rapid developments in … and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … artificial Intelligent/machine learning approaches in data analysis and interpretation is creating new opportunities …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … and, turns out, that high repeat sequence area encoded a polyketide synthase, with many modules of high identity, and … Pacific Ocean, or in the bay, and be able to do chemical analysis, as well as transcript analysis. And what we’re …
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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the biological …
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FICUS
… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for free to the PI by the … provides customized analysis, the JGI also participates in publication of results. …
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Synthetic Biology Lab
… The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic … as user facility that aims to provide access to state-of-the-art DNA synthesis and assembly technologies to the … in:  characterizing novel enzymatic activities using phylogenomic driven approaches, and understanding the design …
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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … cycle times from sample receipt to completion of standard analysis.  Raw data is provided for all sequencing products …
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