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… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … of secondary metabolism.  DAN: Hey there and welcome back for Episode 8 of Natural Prodcast. This week, we have our … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …

… products projects that we had in my group which was bioengineering bio-process R&D, BBRD, a group of about 75 … this is really the basis of the CRAGE technology . So this “Chassis-independent, Recombinase-Assisted Genome Editing” … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …

… welcome, Nadine. ALISON TAKEMURA: What is the big picture for you in your lab? NADINE ZIEMERT: Big picture, I want to … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … is, actually, at the end to get the compound expressed in a heterologous host strain. DAN UDWARY: Yeah, sure. That’s …

… and scientists of secondary metabolism. Welcome back for our second season of Natural Prodcast. This first … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … amino acid out of solution and stick another amino acid or multiple other amino acids onto it to create a small …

… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger … to try and create an open source database of all known microbial natural products. So if you think about natural …

… it’s a little hard to find in print, but we live in the information age and the ebook version is available at most … gene that’s likely to be involved in secondary metabolism – production, say of a certain molecule. If you can find one … not actually on the structure of the protein that you’re engineering… Yeah, the complete system. So there’s more to …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … Takemura, whose voice you’ll hear in a minute – we work for the US Department of Energy Joint Genome Institute, or … right. So I did a PhD in microbiology at MIT, and I studied microbial ecology. I studied Vibrio species in the ocean, so …

IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, … of computational workflows at peta- and exa- scales on multicore and many core architectures with the ultimate …

… to Natural Prodcast! This is episode 4! From here on out, for a while, we’re going to be presenting some conversations … not expressed in the producing fungus. Yyou put them in a heterologous system, and you activate all the genes, and … that’s of the sort that people are looking for, for biofuel production. We’ll see how that goes.    ALISON: Is this the …

Data Policy. It is our mission to support open data and information sharing. We also recognize the need to have a … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … use-restricted data. JGI proposals typically include multiple projects of different types which can span several …

… and SIO. Oh, I should say what those are. Brad: What’s SIO, for all those listeners out there? Dan: Scripps Institution … of environmental health that we’re now working on. And this multi investigator new program that NOAA has funded to … medicine” as a way of the future. We’re really good at engineering small molecules into microbes and making those …