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… development of complex biomolecules — which can include antimicrobial and anti-pest compounds.  The program is working … and function. These species are carefully selected by the community to evenly sample the diversity of the plant … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

… strains. This approach allows for the identification of key functional traits that have direct applications in bioenergy … Program aims to streamline genome analysis workflows for microbial eukaryotes, build fungal and algal pangenomes, and … comparative and genome-centric analyses of fungi and community annotation. … Phycocosm is a comprehensive …

… in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … cells are characterized and selected as based on a specific functional trait or phenotype of interest, prior to and in … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

So, I’ve always known Roger as an expert in natural product structure elucidation, but more recently, he’s been leading … is going to be just invaluable to the natural products community. It’s a big international community effort, and I … to try and create an open source database of all known microbial natural products. So if you think about natural …

… to predict or just understand better the language of microbial cell-cell communication. And he told us about his … here. So definitely no, I do feel like an outsider in this community although both of you have been so wonderful. I … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS … in rank order by the reviewers. The ranked proposal list, along with a recommendation from management at the JGI and … samples of the spatial, temporal, taxonomic (environmental, microbial, plants, invertebrate, and vertebrate), and …

… do you think it was about that? What factors led to the community – not necessarily competing, but – sort of, diving … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the … of fantastic science, mainly in marine natural products structure elucidation, and he trained some of the greats in …

… below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating … genetic microdiversity or core metabolic flexibility? … Microbial contributions to soil carbon storage during …

… cluster database, and a tool for predicting natural product structures from genomes. And I was writing grants furiously … Tilmann on this. But this also has become very open to the community as well, so the versions of antiSMASH that we … IMG kind of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial …

A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell . 184(13):3376-3393 Almeida A, et … colitis reveals a disease-associated bacteriophage community.  Nat Microbiol. 3(9):1023-1031 Harrington LB et … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

… a class of natural product with a really cool chemical structure. We try to explain it, but it’s chemistry, so I … not only I say we were able to make use of it, but also the community can benefit from the technology. But even better, … genomic revolution, to me, as a natural part chemist for microbial natural product, is that I love microbial natural …

… platforms are a key resource for the broader scientific community and require constant developments to meet the … demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic … integrated context. IMG/M provides tools for analyzing the functional capability of microbial communities based on …