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FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … on new computational developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … and archaeal lineages to improve phylogenetic analysis, metagenomic annotations, and function distribution. These …

Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … by accessing various reports on the JGI Portal . Use the search feature to bring up a list of projects that you are …

… in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the … carbon cycling, biodegradation and biogeochemistry. This research helps translate their genomic potential into …

… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … to DOE mission is appropriate. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … started collaborating with Ben and his group to work on sequencing, synthesis and genome mining technology to help … on DNA sequencing and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE ZIEMERT: Yes. … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …

… to only three phyla. The Woyke group uses single-cell sequencing as a means to begin filling this gap. A primary … Giant virus diversity and host interactions through global metagenomics.” Nature 578(7795): 432-436 (2020). Seshadri … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, DNA synthesis … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will submit raw …

… add the characters “.gb” (no quotes, just .gb) to the end of your file name. …