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… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of the product and … metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript …

… Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … fungi, viruses. Resident viruses can be found in a myriad of bacterial strains, whereby they can modulate host …

… Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge … microfluidics/microdroplet technology in order to enhance the quality of single-cell genomes and directly link … The JGI uniquely offers the first quantitative Stable Isotope Probing (SIP) …

… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under … group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … and archaeal genomes that were created – these are Metagenome Associated Genomes, or MAGs. So these are genomes …

… DAN: Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it … know that that’s ever necessarily like a good description of anyone because chemistry means a lot, especially when … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much …

… while, but Natural Prodcast is back again for another round of episodes. If you stick around for the next few months, … for you, we sequenced thousands for you or thousands metagenomes. And I think also the quality that we provide. … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …

… As an Integrative Genome Science User Facility, the JGI plays a … genome science capabilities to support BER's mission of achieving a predictive understanding of complex … the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, and DNA …

… The Joint Genome Institute and the Molecular Foundry have launched a joint Critical … for researchers to request the capabilities and expertise of both national user facilities in one research proposal.  … challenges in the sourcing, recovery, and utilization of critical minerals and materials. The proposal submission …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … that easily can identify secondary metabolite pathways in metagenomes, which is still hard to do. We are mining a lot …

… approved proposal starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …

… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all … for technical help, feedback or a guided walk-through of the new Data Portal.  …