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Natural Prodcast Episode 11: Marnix Medema
… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … clusters. And then they sequenced a really nice and good assembly. They were able to assemble a really high quality … Episode Transcript …
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Viral Genomics Group
… and affect global nutrient cycling, however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at improving our collective understanding of ecological and evolutionary parameters … of viral infections. The Viral Genomics Group is hosted within the Environmental Genomics group . Research Team …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural … encompasses bacteria, archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic elements. … interactions and functions that shape ecosystems. By decoding the microbial DNA in natural environments, the …
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New Lineages of Life Group
… cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand the Tree of Life. … fascinating world of giant viruses, which challenge our understanding of viral complexity and evolution Our research … discovering and characterizing giant viruses, which possess genomes and particle sizes that rival those of cellular …
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Natural Prodcast Episode 14: Nigel Mouncey
… DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so … off today with my interview with the Director of the Joint Genome Institute and head of the Secondary Metabolites … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Sequencing Technologies & Products
… Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing … the Sequencing Technologies team, relies on collaborations with Science Programs and Operations teams to enable the … of sequencing products The JGI operates highly scaled short- and long-read sequencing pipelines. This includes …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … out every two weeks. This time, we’ve got a great interview with Ben Shen, from the Scripps Research Institute in … Episode Transcript … to sequence that collection, mine genomes, and develop new technology to access natural products.  You can …
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FICUS
… applications will focus on high-risk/high-payoff proposals within the focused topic areas that can be completed on an … be otherwise mission-aligned, but proof of concept for the demonstration of a technology that would be applicable to … provides customized analysis, the JGI also participates in publication of results. …
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Assemblathon 1: A competitive assessment of de novo short read assembly methods
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Natural Prodcast Episode 20: Brian Bachmann
… First and foremost, our interview this week is with Professor Brian Bachmann from Vanderbilt University’s Chemistry Department, where he is the … in the early 2000s called Ecopia, which was a very early genome mining company, back when DNA sequencing of natural …
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Biodesign
…   The Joint Genome Institute's Biodesign Platform capabilities support … : a user science group dedicated to user project design, assembly, and quality control Strain Engineering Group : a … Check out our organism-agnostic CRISPR gRNA design tool  … BOOST provides a suite of tools to automate sequence design for …
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Natural Prodcast Episode 8: Eric Schmidt
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … 8 of Natural Prodcast. This week, we have our conversation with Professor Eric Schmidt, from the University of Utah. … Episode Transcript … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …
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