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… and nutrient exchange, as well as microbial and plant responses to environmental changes. With advanced mass … terrestrial biogeochemical processes, development of high performance plants and microbes, and understanding … cycling, plant-microbe interactions, and environmental responses. The program employs advanced mass …

… of Work (SOW). All work performed at the JGI is initiated via the Work Initiation Process (WIP) interface. To submit a … that will be subject to the DOE JGI’s capabilities for sequencing, synthesis and/or metabolomics. Once materials … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …

… other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … (Nature 2019). Other projects in the group include the sequencing and comparative analysis of thousands of archaeal … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

… of these compounds, which, in turn, translate into a high chemical diversity. So that’s just the type of … the definition. And the other thing is that in certain niches, ecological niches, probably Marc Chevrette ‘s … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

… or gammaproteobacteria. They just have this very restricted niche. And they do need broad host-range genetic tools so … we’ll say methyl so we call them methylotrophs [ muh-thigh-luh-trophs ]. This is like, every square is a … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

Earth’s ecosystems. … The Metagenome Program focuses on the high-throughput sequencing of microbial communities to uncover … develop computational tools for analyzing viral fragments via IMG/VR and methods to capture  environmental viral …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, DNA synthesis … transcript sequence Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments Obtained by … ( IMG ) 280/298 Microbial Improved Draft, Isolate High quality draft assembly of long-read sequence data, …

And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … when you’re starting your group is to figure out what your niche is going to be. What are you going to work on that … metabolism you know those numbers are still actually pretty high in terms of understanding from just sequence gazing …

… and functional genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) …

… scientific discovery at the DOE Office of Science through high performance computing (HPC) and data analysis.  The DOE … plan is written into a Statement of Work document. … For sequencing projects, once work is under way, raw sequence … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …

… or low phosphorus), and how cell identity impacts this response. We will eventually construct a bioenergy plant … … Single-cell characterization of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … competition so that they can survive in their ecological niche. ALISON TAKEMURA: Yeah, bacteria sound like a good … talk about isolation. Natural product isolation is not a trivial endeavor. Getting those molecules that are produced by …