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… felt kind of like training for a marathon by running at a high altitude! And a lot of us moved on to work in simpler … took an approach that was kind of a simplified metagenome sequencing approach to pick this system apart.  DAN:  And … You know, unbeknownst to us beforehand, it was made via this ribosomal peptide type of pathway. So that brought …

… resources empower students through isolation and genome sequencing of new fungal species.  Students collect fungi, … into iNaturalist. Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 … Beyond providing a scalable solution for production of high-quality fungal reference genomes, this program is an …

… other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … (Nature 2019). Other projects in the group include the sequencing and comparative analysis of thousands of archaeal … et al. (2014) Genomic Encyclopedia of Bacteria and Archaea: Sequencing a Myriad of Type Strains. PLoS Biology …

… and nutrient exchange, as well as microbial and plant responses to environmental changes. With advanced mass … terrestrial biogeochemical processes, development of high performance plants and microbes, and understanding … cycling, plant-microbe interactions, and environmental responses. The program employs advanced mass …

… or gammaproteobacteria. They just have this very restricted niche. And they do need broad host-range genetic tools so … we’ll say methyl so we call them methylotrophs [ muh-thigh-luh-trophs ]. This is like, every square is a … that are using methane, which seems like a very specialized niche. So there’s certainly going to be some competition …

… of these compounds, which, in turn, translate into a high chemical diversity. So that’s just the type of … the definition. And the other thing is that in certain niches, ecological niches, probably Marc Chevrette ‘s … us, we want to hear from you. We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, …

… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, Biodesign and … of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will submit raw … have been  discontinued , including smRNA, bisulfite sequencing, and ChIP-seq. …

… And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … when you’re starting your group is to figure out what your niche is going to be. What are you going to work on that … metabolism you know those numbers are still actually pretty high in terms of understanding from just sequence gazing …

… of Work (SOW). All work performed at the JGI is initiated via the Work Initiation Process (WIP) interface. To submit a … that will be subject to the DOE JGI’s capabilities for sequencing, synthesis and/or metabolomics. Once materials … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in … The Metagenome Program focuses on the high-throughput sequencing of microbial communities to uncover … develop computational tools for analyzing viral fragments via IMG/VR and methods to capture  environmental viral …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … competition so that they can survive in their ecological niche. ALISON TAKEMURA: Yeah, bacteria sound like a good … talk about isolation. Natural product isolation is not a trivial endeavor. Getting those molecules that are produced by …