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Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … technology for DNA sequencing, genomics, metabolomics, and synthetic biology, that maybe they don’t have available in … Prodcast, a podcast produced by the US Department of Energy Joint Genome Institute. In each episode, we’ll be discussing …
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Frequently Asked Questions: Proposal Submission
… of Frequently Asked Questions about our proposal submission process. You can review successful letters of intent and submissions at the … Review the list of open calls ; click on the call link to … proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New …
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CSP Large Scale Call
… materials, inter-organismal interactions, and predictive biology, modeling and biodesign — questions of relevance to … capabilities. All proposals will be externally peer-reviewed for scientific merit, DOE mission relevance, … the general review process or get details on the internal synthetic biology review process .  …
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CSP New Investigator Call
… about the general review process or get details on the internal synthetic biology review process .  … Proposers are encouraged to review the JGI’s sample requirements . Samples that are not available in a timely manner will delay processing, while samples that are of insufficient quality …
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Publications
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User Programs
… projects that call for expansive sequencing, synthetic biology, and metabolomics capabilities Investigators who … 2026  11:59pm PT  Sep 8, 2026 Jan 29, 2027 March 31, 2026 Review Date June 2026 July 2026 October 2026 March 2027 …
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Project Management Office
… technical staff to onboard users and guide them through the process of working with our facility. This includes help … Please review our FAQ in advance of contacting the PMO office.  …
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Products
… all products are available for all proposal calls.   Please review the call language carefully to ensure that your … available options. Note: In 2021, we conducted an extensive internal product audit to analyze the scientific value, … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) …
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Natural Prodcast Episode 20: Brian Bachmann
… Department, where he is the PI of the Laboratory for Biosynthetic Studies. Brian and I are old friends and … in the early 2000s called Ecopia, which was a very early genome mining company, back when DNA sequencing of natural … Yeah, I went to a SIMB meeting, Society for Industrial Microbiology meeting and– DAN UDWARY: Which is where we are …
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The Joint Genome Institute's synthetic biology internal review process
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located … with partner organizations such as the DOE Systems Biology Knowledgebase and the National Microbiome Data … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a high-throughput AI-centric …
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Viral Genomics Group
… While an ever-increasing number of phage and virus genomes have been assembled and reported from metagenomes, our understanding of the impacts of these viruses on microbiome processes is still limited. One key challenge is to … filter, cluster, annotate, and bin viruses from metagenomes. mSystems 9:e00888-24. …
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