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… to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … Program aims to streamline genome analysis workflows for microbial eukaryotes, build fungal and algal pangenomes, and …

… Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the development of biofuels, biochemicals and other … the design and synthesis of complex genetic pathways and biosystems. It The program fosters collaboration with U.S. and …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … of the IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial Genomics. It’s one of the big data …

… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … cycle times from sample receipt to completion of standard analysis.  Raw data is provided for all sequencing products below. In … physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial …

… The JGI’s data stewardship expertise and infrastructure enable a broad … to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic …

… Read more about our data management practices and the resources we provide. … Read our research integrity and data code of conduct. … Data Management at the JGI …

… and a tool for predicting natural product structures from genomes. And I was writing grants furiously to try to get … when it’s, well, when the code is good enough, it can be integrated into the code base. And at the moment, we have … IMG kind of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial …

… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to …

… yes, sure, right. And yeah, so we worked on the Salinospora genomes. That was a really fun project. We had Brad on and … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … in the past, we’ve had these monolithic databases, NCBI and IMG , that have a lot of data and really useful data, really …

… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by … parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and … While an ever-increasing number of phage and virus genomes have been assembled and reported from metagenomes, …

… Now when I was in fourth year, we had a choice to do an integrated master’s program that was by the Royal Society of … And sometimes, in terms of biological activities– like antimicrobial or something– sometimes a little difference is … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …

… Investigator Providing a general orientation to JGI systems to Investigators Preparation of formal Statement of … execution by: Verifying metadata and coordinating with IMG , GOLD and others for data annotation and submission … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …