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Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

… them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With … … Projects and Initiatives … Metabolomics Program Head … Resources and Tools …

… development of complex biomolecules — which can include antimicrobial and anti-pest compounds.  The program is working … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) … physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial … on genome characteristics, availability of external resources and project goals. Selected genomes will be …

… to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National … making it difficult to propose projects that truly integrated the capabilities of more than one facility. The … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …

… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … … Read more about our data management practices and the resources we provide. … Data Policy … Legacy Data Policy … …

… this identification, metabolomics enables functional genome annotation, improves understanding of the role small molecules play in diverse biological … & Metabolomics Instrumentation … Metabolite Submission Resources & Guidelines … Metabolomics Platform Lead … More …

… 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell . 184(13):3376-3393 Almeida A, et … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … when it’s, well, when the code is good enough, it can be integrated into the code base. And at the moment, we have … IMG kind of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial …

… off today with my interview with the Director of the Joint Genome Institute and head of the Secondary Metabolites … I did my undergraduate in microbiology and then PhD in microbial genetics in the UK. And came across to the US for … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …

Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology … analyses compile original data for improving fungal genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect …

Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them … ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily achievable … any questions prior to proposal submission.   … Additional Resources …