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DNA Synthesis Program
… decomposition, CO2 fixation, redox reactions, and plant metabolite biosynthesis, synthesizing and … supports researchers exploring how to convert sequence into functional assessments. The team has a research & … clade-specific orthology/paralogy relationships as well as insights into clade-specific novelties and expansions.  … …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
Commonly known as liverwort, this was done to gain insights into gene families involved in adaptations seen in later … to expand their research into analyses of early-diverging land plants to further understand their evolutionary …
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Natural Prodcast Episode 17: Cassandra Quave
… always wanted to write a book but it’s really hard to break into that area. I mean you have to secure an agent and … history of what happened in Indonesia, in the Banda Islands, with everyone that’s enjoying their pumpkin spice … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as …
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Natural Prodcast Episode 14: Nigel Mouncey
NIGEL MOUNCEY: No, I’m not. I grew up in the South of England, in rural England. I kind of always wanted to be a … thought I’d take an academic job then, but I ended up going into industry. Saw a job at Roche, and that was to work with … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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FICUS
… provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS … to DOE mission areas.  Initiate a new LOI by logging into the   EMSL User Portal  and clicking “Submit a … the spatial, temporal, taxonomic (environmental, microbial, plants, invertebrate, and vertebrate), and thematic scope of …
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Natural Prodcast Episode 12: Nadine Ziemert
… than it is now. Or a little more– yeah, put more rationale into drug discovery by knowing what these things actually do … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to …
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Natural Prodcast Episode 6: Marc Chevrette
So maybe we could start with that background – what got you into secondary metabolism, besides being forced to work with … not familiar, it’s basically a throwback to “Alice In Wonderland” where the Red Queen just runs faster and faster to … to go in the next couple years. And hopefully, some of the insights that we glean from that will be broadly applicable …
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Natural Prodcast Episode 13: Francisco Barona Goméz
BARONA-GOMEZ: I think that the very first thing that got us into this is that we should, in any case, use definitions … is very important, because then you can see it as a fitness landscape, which is very common in evolutionary biology but, … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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Genome Insider
… understand — and harness — the superpowers encoded in plants, fungi, microalgae, environmental viruses, and … world. Learn about JGI-supported projects, delving into the researchers’ motivations, the insights that amaze them, and how their work contributes to …
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Products
… the product and deliverables as well as target cycle times from sample receipt to completion of standard analysis.  Raw … small genes assembled to less than 5kb in length, cloned into vector of choice Glycerol stock of sequence verified … contigs. Assembly, annotation ( IMG ) Depends on project Plant and Algal Standard Draft Whole genome shotgun …
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JGI Portals
… to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — … clade-specific orthology/paralogy relationships as well as insights into clade-specific novelties and expansions.  … The SMC …
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Natural Prodcast Episode 7: Ben Shen
… for every episode we put out. I actually put a lot of time into preparing those transcripts, so I hope somebody’s going … natural product – they also often surprise us by giving us insights, inspires us to discover the fundamentals and then … product chemistry? BEN:  Yeah. So, I was trained as a plant natural product chemist. When I first started in …
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