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… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … Proposals accepted before FY22 are transitioning away from producing use-restricted data. JGI proposals typically …

… driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … of sequence space:  The JGI generates reference genomes from diverse bacterial and archaeal lineages to improve … from environmental samples.  … The IMG/M system serves as a community resource for comparative analysis and annotation …

… off today with my interview with the Director of the Joint Genome Institute and head of the Secondary Metabolites … technologies. Nowadays people are really looking at these assembly line pathways – polyketides – as ways to produce … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …

… provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS call with EMSL begin with a Letter of Intent (LOI) from a researcher, briefly describing the project … facilities, who consider technical feasibility and readiness to begin work. During scientific peer review, …

… improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of … for very large-scale single genomes, based on the JGI assembly tool meraculous. It is now available for both …

Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … we get to present our conversation with Marnix Medema , from Wageningen University in the Netherlands. Marnix is … clusters. And then they sequenced a really nice and good assembly. They were able to assemble a really high quality …

You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … in the project by watching Amanda Hurley’s presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] … you know more about the community less of the micro – the individual microbe. Oh, yeah, I think that I think that’s …

And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that … not be advantageous from a fitness perspective for these individual cells to be transcribing and doing unless there’s … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect … selected for sequencing 16 genomes released 20 members from 15 institutions 300+ students 800+ iNaturalist … which is then sent to the JGI for genome sequencing, assembly and annotation. … The Mycocosm portal supports the …

… guess but maybe 50 to 100 different strains and they are in individual tubules.  And so these tubules are like tiny … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … week, we have our conversation with Professor Eric Schmidt, from the University of Utah. I’ve known Eric for a long time … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …