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… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and … analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … The Microbial Program focuses on using advanced sequencing technologies …

… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting … 1) Complete Sample Metadata form Sample metadata is collected via …

… Find protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction … Tips for High Molecular Weight DNA extraction: … RNA Extraction Protocols: … iTag protocols: …

… Data produced and released by the US Department of Energy (DOE) … the need to have a limited and time-sensitive protection of certain types of data to support their use by those … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …

… The Synthetic Biology lab is divided into a DNA synthesis production group and a … as user facility that aims to provide access to state-of-the-art DNA synthesis and assembly technologies to the broader community.  We focus our efforts on integrating database mining and sequence design with scaling the …

… Research in the Eloe-Fadrosh group focuses on using … genomic information from uncultivated microbes and viruses. We develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … Our research focuses on the assembly of metagenomic sequence data …

… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … Scientific Program Product Description Deliverables Cycle Time FY25 Q1  …

… Eukaryotic projects: Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA Synthesis projects: Miranda Harmon-Smith Metabolomics … You can visit the Products & Offerings section of our website for …

… DAN UDWARY: You’re listening to the Department of Energy … of searching the internet, searching literature, and making databases. Because that’s what I noticed is really a … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …

… Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … symbionts, detrimental microbial pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are … Plant microbiomes hold the amazing ability to influence plant …

… The Joint Genome Institute and the Molecular Foundry have launched a joint Critical Minerals and … for researchers to request the capabilities and expertise of both national user facilities in one research proposal.  … Access to the Molecular Foundry and use of JGI capabilities …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … him about more recent work like ActDES, which is a curated database of actinobacteria for evolutionary studies, and … Episode Transcript … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …