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… molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … a combination of experimental workflows and computational analysis, JGI scientists are able to link metabolic activity …

Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … when it’s, well, when the code is good enough, it can be integrated into the code base. And at the moment, we have … primer episode, we talked about genome mining through some metagenome associated genomes. And yes, antiSMASH is …

… the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and … … The IMG/M system serves as a community resource for comparative analysis and annotation of all publicly … available genomes from three domains of life, in a uniquely integrated context.  … The MycoCosm web portal provides data …

… making it difficult to propose projects that truly integrated the capabilities of more than one facility. The … There is no cost to the user and no granting of funds. All data is made publicly available in accordance with  JGI’s … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical …

UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … is a larger portal for microbial genomics. IMG stands for Integrated Microbial Genomics. It’s one of the big data …

UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … that easily can identify secondary metabolite pathways in metagenomes, which is still hard to do. We are mining a lot …

The User Support Analysis group provides computational analysis for new technology development and JGI user science … for diverse experiment types, with main focus areas being genome variation, transcriptomics and epigenomics. Our work …

… listed on the “info” page for that organism on the Genome Portal . … You can view the status of all public … IMG (citation: https://doi.org/10.1093/nar/gkaa939 ) Metagenomes and Single Cells: IMG/M   (citation: … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … …

… across at least two of the facilities, and generate datasets beyond what each of these facilities could generate … accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …

… do the bioinformatics and to synthesize these results into publication? So there’s this really important because we … for microbial genome that means an annotated genome that’s integrated into our integrated microbial genomes system, … is over, the data gets released on our portals, such as IMGM. But we also then push the data to GenBank. So the raw …