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… the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural products and the science … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … in the past, we’ve had these monolithic databases, NCBI and IMG , that have a lot of data and really useful data, really …

Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

The JGI Project Management Office carries out a number of activities … execution by: Metadata verification and coordination with IMG , GOLD and others for data annotation and submission … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …

The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique opportunity for researchers to request the … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …

Below is a brief description of the process needed to prepare and … (or completes the form online) PM submits metadata to JGI database for shipping approval (n/a if using web-based form) …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, DNA synthesis and pathway engineering Mass … Environmental transcript sequence Assembly, annotation ( IMG/M ), mapping 273/273 Metagenome Cell Enrichments …

Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the … onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that really got me into that … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

Data produced and released by the US Department of Energy (DOE) … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … JGI Genome/Data Portal, MycoCosm, PhycoCosom, Phytozome, or IMG) and outside repositories (e.g. NCBI SRA or GenBank; …

… … Dan Udwary: Hey, Alison Takemura: Hey, Dan. Dan Udwary: Today … this podcast, the idea of taking all the different natural products data that there is and putting things, coalescing … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a podcast about natural products and the science … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

Metabolomics strengthens -omics technologies at the JGI by identifying the actual molecules present in an environment that influence system behavior. … functional genome annotation, improves understanding of the role small molecules play in diverse biological …