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… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses … viruses and mobile genetic elements. Beyond exploring and characterizing microbial diversity, work in the … microbe-microbe and virus-microbe interactions, over ecological and evolutionary time scales.The Metagenome …

… Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is … ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ students 800+ … Beyond providing a scalable solution for production of high-quality …

… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning … coding potential to find novel functions that may impact microbiome structure and biogeochemical cycles. Research …

… were, what they were doing in these genomes and how they change over time. And yeah, I mean, that was let’s see, … So a lot of my work is as focused on insects As a host, and a little bit of my newer work is focused on … ALISON: You know, clearly you both have thought about the ecological theory and evolutionary theory that relates to …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … I wanted to go into international agriculture. I had really changed my mind. I was thinking of medical school first, but … two projects with JGI. The fungal sequencing one is with a host of many other fungal researchers.    DAN: Got it.    …

… metabolites are being produced in the environment for ecological reasons. ALISON: Can you give me an example?  … that’s used for secondary metabolism, they are copies and changes that nature has made. So secondary metabolism is … at naturalprodcast.com Special thanks, as always, to my co-host, Alison Takemura. <woohoo> If you like Alison, and want …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … the group has, I guess… Maybe my philosophy has sort of changed over the years. And I think maybe over the last 10 … at naturalprodcast.com Special thanks, as always, to my co-host, Alison Takemura. <woohoo> If you like Alison, and want …

…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility … Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative … as the DOE Systems Biology Knowledgebase and the National Microbiome Data Collective.    …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … ecosystem function.  The Environmental Genomics group also hosts the Viral Genomics group . Research Team    … focuses on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value to …

… for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … the future. So, then we were using these probes to look at host pathogen interactions mostly with like enteric … the bacteria part of that. And so I decided to completely change gears and go and do a postdoc with a woman named Mary …

… rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … a version of the User Agreement between HHMI, your Host Institution and LBNL is required. NOTE:  If a PI changes academic institutions or a new PI is named during …

… As a National User Facility, the JGI serves more than 2,500 users that predominately come from the public sector: academic and government institutions — with capabilities that had remained largely … User Programs entail a competitive, proposal-based process including peer review. The process is streamlined, with …