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Viral Genomics Group
… parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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Micro-Scale Applications Group
Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our … that utilize microfluidics/microdroplet technology in order to enhance the quality of single-cell genomes and directly …
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Microbiome Data Science Team
… discoveries and catalyzing a major transition of biology into data science.  Research in the Kyrpides group focuses on … A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell . 184(13):3376-3393 Almeida A, et … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… in medicines for people, but also those molecules that mediate a well functioning ecosystem and environment and … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … of the IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial …
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Data Policy
… of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … repositories until the earliest of three points:  (1) publication of the data (including, but not limited to, …
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SPRUCE-ing Up Science
… fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial communities mediate Sphagnum peatmoss …
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Natural Prodcast Episode 23: Aaron Puri
… to predict or just understand better the language of microbial cell-cell communication. And he told us about his … community. For us, it’s these methane oxidizing bacterial communities that we like to look through as a lens, and … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of single-cell methods to access … in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
A nuanced understanding of peat moss drives insight into carbon storage   The Science Boggy peatlands, which hold … that can be converted to energy, are made up heavily of sphagnum mosses.  New research identifies sex chromosomes in … is vital to preserving peatlands in the face of a warming climate. Identifying these sex chromosomes and their …
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Examples: Successful LOIs & Submissions
… genetic microdiversity or core metabolic flexibility? … Microbial contributions to soil carbon storage during … of the gene regulatory networks governing terpenoid-mediated plant environment interactions to enable advanced … bioenergy crops … Characterization of simplified soil communities with high and low carbon use efficiency across …
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Institutional User Agreements
Appendix identifies the type of work or specific proposal to be covered under the Agreement. The signing official must … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … performance period, your Project Manager must be notified immediately. Either of these changes may require new signed …
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FICUS
… call represents a unique opportunity for researchers to request the capabilities and expertise of multiple DOE … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS … samples of the spatial, temporal, taxonomic (environmental, microbial, plants, invertebrate, and vertebrate), and …
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