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… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided …

… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … in a myriad of bacterial strains, whereby they can modulate host metabolism, gene expression and phenotype. We have … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … a variety of environments. ENVnet allows us to uncover globally distributed molecules with conserved structures, … analysis. Click for more details, including an overview of our products.  … The MAGI toolkit links …

… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … a version of the User Agreement between HHMI, your Host Institution and LBNL is required. NOTE:  If a PI …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … microbial ecosystems.  The Program also aims to build a global-scale catalog of viral, microbial, and microeukaryote … new approaches to address some of the world’s most pressing challenges. … Exploration of phylogenomic novelty: Advances …

Overview The JGI provides sequencing, synthesis, and … ,  Science Focus Areas  (SFA) opportunities, and the  Office of Science Early Career Research Program .   If … are more easily converted to fuels. This Center also has a major focus on sustainability, examining the environmental …

… functional genome annotation, improves understanding of the role small molecules play in diverse biological … liquid chromatography mass spectrometry (LC-MS) based methods in combination with advanced computational analysis.   Overview of metabolomics products At JGI, in-depth molecular …

…   To understand virus-host dynamics, computation helps fill in what cultivation … With metagenomic sequencing, researchers have found more of these viruses than ever before, in all kinds of … what these viruses can do. Building on existing virus-host prediction approaches, researchers have created a new …

… and novel automations for DNA design, assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables … for assembly by Gibson, Yeast recombination and Golden Gate methods … gRNA-SeqRET … BOOST … Synthesis Platform Lead … …

… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … the future. So, then we were using these probes to look at host pathogen interactions mostly with like enteric … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … under standard laboratory conditions by their native hosts. We are developing cell-free based systems to express … their binding sites across multiple genomes. Computational prediction of heterologous expressability: We are developing …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … start. Databases like, I think, JGI’s ABC also has a nice overview of all these different gene clusters. That helps. I …