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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, … exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With …
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Institutional User Agreements
… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … really the same kind of thing. Before the age of genome sequencing, we had to basically break up the pieces of DNA …
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Publications
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Mission
JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the … program, the Joint Genome Institute provides advanced genomic capabilities, large-scale data and professional … of Energy.   The JGI provides integrated high-throughput sequencing, DNA design and synthesis, metabolomics and …
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Sequencing Technologies
The Sequencing Technologies Group applies cutting edge molecular capabilities and state-of-the-art next-generation sequencing to enable biological … with the Project Management Office to help ensure the JGI’s genomic capabilities are ready and applicable to users.  … …
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CSP Large Scale Call
The Community Science Program Large Scale Call is focused on genomic science projects that address sustainable biofuel and bioproducts production, leveraging systems-based … and track record of the applicant. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be …
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Microbiome Data Science Team
… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …
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New Lineages of Life Group
… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C …
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Data Policy
Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … PI and receive permission for their planned work.   … For sequencing or metabolomics projects: data are subject to a  …
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Offerings & Capabilities
The central mission of the JGI’s Genomic Technologies department is   ensuring … science by generating data in three overarching categories: Sequencing, Synthesis and Metabolomics. Strong internal …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … started collaborating with Ben and his group to work on sequencing, synthesis and genome mining technology to help … on DNA sequencing and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a …
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