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… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … was like a nice summer day in Seattle I think this was like 2013 or 2014. And antiSMASH — I know you’ve interviewed … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … the world who have made additions to antiSMASH, contributed features. That has been great fun to actually work with so … of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial genomes. And …

And if we could actually link terms to those emerging features that are natural to this complex, then we might … I think the important thing to remember is that, thanks to genomics, we now know that it is very hard to find stuff … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … with an active JGI User Agreement older than January 2024 will be required to execute a 2024 version .  The …

… constraints exerted by viruses. Research in the viral genomics group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

The central mission of the JGI’s Genomic Technologies department is   ensuring … to focus on expanding molecular capabilities and functional genomics, scaling capacity through end-to-end automation, …

The Community Science Program Large Scale Call is focused on genomic science projects that address sustainable biofuel and bioproducts production, leveraging systems-based approaches to unravel functional capabilities of plants, microbes and microbial communities, global carbon …

The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic …

… constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. … The JGI Genome … from genomes, metagenomes, and metatranscriptomes. It features over 15 million viral genomes and fragments, …

JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the … program, the Joint Genome Institute provides advanced genomic capabilities, large-scale data and professional … this information freely to the public databases. In 2004, the JGI established itself as a national user …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … brought me into that field. And when I found this, it had features of other ribosomal peptides, but really mixed up … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …

Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … focused on the application of  function-driven single-cell genomics . Here, single cells are characterized and selected … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …