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… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … University of Tübingen. This continues our short series of genome mining, the science of examining DNA sequence to try …

… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … had just not  been released yet. And there was also some transcriptome data. And my first task during that project … with AntiSMASH , which is available for analysis of your genomes on the web , or you can download a docker container …

… And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we … Marcy is talking about. Then you have to first– there’s an interplay between the sequence and the chemistry where you …

… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … Embargo : A period in which data is not publicly available in JGI systems or … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …

… critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by viruses. Research in the viral genomics … group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host …

… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, Biodesign and pathway … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) …

… The Facilities Integrating Collaborations for User Science (FICUS) call … for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … provides customized analysis, the JGI also participates in publication of results. …

… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to …

…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our … profiling transcription factor binding sites across entire genomes. This technology has been further scaled to a …

… Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching … genomic resources empower students through isolation and genome sequencing of new fungal species.  Students collect … solution for production of high-quality fungal reference genomes, this program is an important initiative that …