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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …
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Data Policy
… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … had just not  been released yet. And there was also some transcriptome data. And my first task during that project …
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Natural Prodcast Episode 16: Marcy Balunas
And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we … Marcy is talking about. Then you have to first– there’s an interplay between the sequence and the chemistry where you …
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Environmental Genomics Group
Research in the Eloe-Fadrosh group focuses on using genome-resolved … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …
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FICUS
The Facilities Integrating Collaborations for User Science (FICUS) call … for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …
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Products
The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) … structural rearrangements, alignment files 384/454 Fungal Transcriptome RNA for expression profiling and genome …
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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, … the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and …
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Natural Prodcast Episode 23: Aaron Puri
… for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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Viral Genomics Group
… critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by … al. (2019) Minimum Information about an Uncultivated Virus Genome (MIUViG).  Nature Biotech .  37 , 29–37 Roux S, et … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a podcast about natural … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular …
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