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Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a recent  … composition of genes, or pangenome, of the model plant  Marchantia polymorpha. Commonly known as liverwort, this was done to …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … sequence 1000 fungal genomes from across the Fungal Tree of Life, from an international research team in collaboration … of fungal genes conserved across the fungal tree of life or its major branches for users to characterize and …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … drive innovations that could advance our understanding of Earth’s ecosystems. … The Metagenome Program focuses on … of all publicly available genomes from three domains of life, in a uniquely integrated context.  … The IMG/VR system …

Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … associated with the chemistry department as well as the life sciences department. So welcome, Alison to today’s … with the co-factor is bound throughout the catalytic cycle. So that co-factor stays in the active site. And then …

PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … Plasmid Repository) at the end of the embargo period. … During the embargo, proposal PIs, Co-PIs, and collaborators … acceptance and may also be added during the proposal lifecycle based on scientific need. Proposals are considered …

… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … Novel approaches are being explored to predict microbial lifestyles using AI-driven analysis of such datasets. The … of all publicly available genomes from three domains of life. It provides tools for analyzing the functional …

… to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National … provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical … technical feasibility and readiness to begin work.  During scientific peer review, proposals are evaluated and …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … of if there’s anything kind of in my normal day-to-day life where there are 87,000 kinds. What fraction of those …

The JGI Project Management Office carries out a number of activities to facilitate … initiate analysis with the appropriate JGI analysis team. During this time, your Project Manager will: Coordinate JGI … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …

… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … they probably weren’t isolating bacteria on methane gas during their time. DAN: That’s virtually guaranteed. AARON … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… do the bioinformatics and to synthesize these results into publication? So there’s this really important because we … notified, we work with you to set up an initiation call. During the initiation call, you’re going to meet with the … after the initiation call. But throughout the whole lifecycle of the proposal, it’s a very collaborative process …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … LB et al. (2017) A thermostable Cas9 with increased lifetime in human plasma.  Nat Commun . 8(1):1424. Sczyrba … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …