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… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … natural product producing organism, the Actinomyces, was completed in early 2000s. One of the major discovery from …

Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI. … Procedure GenTegra RNA Preparation Procedure … 1) Complete Sample Metadata form Sample metadata is collected … Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? …

… a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the … for bioenergy and bioproduct applications. The program has completed over 70 projects, including gene synthesis, … the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and …

The Metagenome Program uses advanced sequencing technologies to … assembly and binning have enabled reconstruction of complete or near-complete population genomes directly from …

The focus of this group, in recent years, has been to bring … represent an additional phase of user-accessible project types, in which DNA-based molecules can be chromosomally …

… call represents a unique opportunity for researchers to request the capabilities and expertise of multiple DOE … proposals within the focused topic areas that can be completed on an accelerated timeline as compared with the … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …

… capabilities and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA synthesis requests, the … science.  Projects include de novo generation of genome data, assistance in interpreting and/or building on …

Group applies cutting edge molecular capabilities and state-of-the-art next-generation sequencing to enable biological discovery by the JGI and external DOE … the latest  sequencing technologies has allowed the JGI to increase sequencing output while significantly lowering …

… successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on … proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New … There is no cost to the user and no granting of funds. … A complete listing of approved proposals can be found …

Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental … and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … The  1000 Fungal Genomes Project is a five-year project to sequence 1000 fungal genomes from across the Fungal Tree of …

… discoveries and catalyzing a major transition of biology into data science.  Research in the Kyrpides group focuses on … Nayfach S, et al. (2021) CheckV assesses the quality and completeness of metagenome-assembled viral genomes. Nature … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

… now I’m working on this the afternoon of the day I’m due to release it, which is not ideal for me keeping myself on … in love with the bacteria part of that. And so I decided to completely change gears and go and do a postdoc with a woman … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …