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Natural Prodcast Episode 12: Nadine Ziemert
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … have the big goal of making that process a little more effective than it is now. Or a little more– yeah, put more … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … It’s called MIBiG , which is the database that has the “minimum information about a biosynthetic gene cluster”. And …
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Natural Prodcast Episode 18: A CSP Primer
… while, but Natural Prodcast is back again for another round of episodes. If you stick around for the next few months, … CSP. We need to work in a certain scale. So there’s a minimum. But again, somebody, a PI, should submit a fairly … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such effort is … gap is also reflected in the strongly biased representation of sequenced genomes in the public domain, the bulk of which …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial …
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New Lineages of Life Group
… Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find … Exploring the fascinating world of giant viruses, which challenge our understanding of viral …
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Frequently Asked Questions: Proposal Submission
… See below for a list of Frequently Asked Questions about our proposal submission process. You can review successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call link to see specific details including project …
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Metagenome Program
… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work encompasses bacteria, archaea, and … activity across ecosystems.  By studying microbial communities and their interactions, the Program aims to … Program focuses on the high-throughput sequencing of microbial communities to uncover the complex interactions …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… Hey, everyone! Welcome to the “Self Promotion Episode” of Natural Prodcast. A little bit of a bonus episode, since … Dropping F bombs. We should do some kind of special sound effect like a kazoo. DAN UDWARY: I do have some beeps and … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …
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Microbiome Data Science Team
… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … advances in management, processing and visualization of “big data,” and artificial Intelligent/machine learning …
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Data Policy
… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our mission to support open data and information sharing. We also recognize the need to have a … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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Viral community analysis in a marine oxygen minimum zone indicates increased potential for viral manipulation of microbial physiological state
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