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Data Ecosystem
… … Through its partnership with NERSC and the DOE Energy Sciences Network (ESNet), the JGI has unique access … new possibilities in microbiome data science. … National Energy Research Scientific Computing Center … DOE System …
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Environmental Genomics Group
… et al.  A Genomic Catalog of Earth’s Microbiomes .  Nature Biotechnology . 2020 Nov 9. Vyshenska, Dariia et al. (2023)  … et al.  A Genomic Catalog of Earth’s Microbiomes .  Nature Biotechnology . 2020 Nov 9. doi: 10.1038/s41587-020-0718-6. … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …
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Metabolomics
… in combination with advanced computational analysis.   Overview of metabolomics products At JGI, in-depth molecular …
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Frequently Asked Questions: Project Management
… shipments can be found in the Sequencing Sample Overview file in our HERE (TK) .  Note: the JGI does not … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page.    … … work done by the JGI. More information is available in our Publications Policy on our Data Policy & Support page.  … …
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Synthesis
… synthesizing genes, pathways, and whole chromosomes for bioenergy, nutrient cycling and bioproduct applications.  The … and novel automations for DNA design, assembly and analysis Overview of synthesis products The JGI DNA Synthesis …
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Viral Genomics Group
… . Research Team … Coclet, C. and Roux, S. (2021) Global overview and major challenges of host prediction methods for … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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Natural Prodcast Episode 23: Aaron Puri
… they can use methane gas as their sole source of carbon and energy. And it was before group meeting and it was like a … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum … 2023 Aug 31;14(4):e0101023. doi: 10.1128/mbio.01010-23. Publication: Cummings DA Jr. Methylotroph Quorum Sensing …
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Partners
… a long-term partnership with the HudsonAlpha Institute for Biotechnology for our Plant Program, and is further … with DOE computational facilities (e.g., the National Energy Research Scientific Computing Center (NERSC) and data …
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FICUS
… and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …
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Overview of the Genomes OnLine Database (GOLD)
TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why …
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Metabolomics Program
… genes, and proteins. It also enables exploration of energy and nutrient exchange, as well as microbial and plant … bioeconomy, environmental sustainability, and improving bioenergy crops. … The Metabolomics Program is focused on … analysis. Click for more details, including an overview of our products.  … The MAGI toolkit links …
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Special Initiatives & Programs
Overview The JGI provides sequencing, synthesis, and … and synthesis on behalf of the U.S. Department of Energy Bioenergy Research Centers.  The Centers are intended to …
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