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… into DNA by active microbial populations (Hungate et al. 2015). With the development of high-throughput SIP (Nuccio et al. 2022) and terabase-scale metagenome combined assemblies (Hofmeyr et al. 2020) we are able to quantify isotope incorporation across a … S., Roux, S., Seshadri, R. et al. A genomic catalog of Earth’s microbiomes. Nat Biotechnol 39 , 499–509 (2021). …

… indemnification, patent rights, rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … with an active JGI User Agreement older than January 2024 will be required to execute a 2024 version .  The … from the approved start date. Additional time requires the Project Manager’s approval. An amendment to extend the …

… drive innovations that could advance our understanding of Earth’s ecosystems. … The IMG/VR system serves as a starting point for the analysis of viral genome fragments … to information regarding genome and metagenome sequencing projects, and their associated metadata, around the world. …

… an accelerated timeline as compared with the standard CSP projects. In addition, they must utilize a broad range of … of these facilities could generate by itself.   Accepted projects must address or be otherwise mission-aligned, but … provides customized analysis, the JGI also participates in publication of results. …

… Cataloging Earth's microbial lineages through advanced genomic … to catalog and understand the vast number of microbes on Earth. This ongoing census helps reveal new lineages and … Studying microorganisms that thrive in Earth's most extreme environments: We study genomic …

… is kind of like a CSP, but you would be proposing a larger project that requires the work of two or more DOE user … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we … comparative analysis system. Once that is completed, the clock starts to tick. And then for one year only the PI, and …

… materials. The proposal submission deadline is March 31, 2026 .  … or differential gene expression results. For DNA synthesis projects, JGI ships physical materials like expression … charge for non-proprietary research; the vast majority of projects fall into this category. Users are responsible for …

… As a National User Facility, the JGI serves more than 2,500 users that predominately come from the public sector: … by industry. When Director Nigel Mouncey joined the JGI in 2017, he brought with him 20 years of industry experience — and an opportunity to … Science Program, the JGI sequenced and characterized 270 genomes of the Clostridium genus for LanzaTech, …

… Coclet C, Camargo AP, Roux S. (2024) MVP: a modular viromics pipeline to identify, filter, … revealed as pervasive in bacteria and archaea across Earth’s biomes. Nature Microbiology. 4, 1895–1906. … Selected Publications …

… Notice Effective July 27, 2026, the JGI will move to a new login service, … including a Login Walkthrough and FAQ . –– The JGI Project Management Office carries out a number of activities … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …

… provides customized analysis, the JGI also participates in publication of results. Go here for additionial information, … to DOE for final approval. Following DOE approval, project managers negotiate project specifics with PIs (including JGI scientists as … general questions, please reach out to Christa Pennacchio, Project Management Office. Direct any questions about the …