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… while, but Natural Prodcast is back again for another round of episodes. If you stick around for the next few months, … for you, we sequenced thousands for you or thousands metagenomes. And I think also the quality that we provide. … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …

Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … areas of the tree of life, as reference genomes are critical to serve as phylogenetic anchors for metagenomes … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …

Prodcast episode 17. The guest we have this week is Professor Cassandra Quave from Emory University, with joint … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … pathogen. And I think it’s important to note just as critically that billions that’s with the B, billions of …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … if an order is uncultured (blue; represented only by metagenome-assembled genomes or MAGs) or cultured (gray; …

… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that really got … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… is eager to work and share our tools with a widening circle of researchers. That’s why twice each year we look for novel … our Community Science Program .  Below find a list of the second round of researchers accepted for 2023. Proposals are …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … that easily can identify secondary metabolite pathways in metagenomes, which is still hard to do. We are mining a lot …

Microbes drive critical ecosystem functions and affect global nutrient … group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of … It is now available for both eukaryotic and microbial metagenome assemblies. It is also available as an app in …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … the end, we took an approach that was kind of a simplified metagenome sequencing approach to pick this system apart.  … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …

…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … which are not essential for fundamental growth, provide critical advantages to the organisms producing them, and are …

Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also seeks out new approaches that utilize microfluidics/microdroplet technology in order to enhance the …