Search

… = 91 days; Actual Operation = 24 days due to significant sequencer downtime related to the shelter-in-place. ††† … developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on progress … [Download PDF]   FY 2014 Overall Sequencing Progress, Updated Quarterly Quarter Total Bases (Billions) Operating …

… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … proposals within the focused topic areas that can be completed on an accelerated timeline as compared with the … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …

… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … that will be sent from JGI when their technical work is completed.  Having the MTA in place before work starts will …

… and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … The  1000 Fungal Genomes Project is a five-year project to sequence 1000 fungal genomes from across the Fungal Tree of … its major branches for users to characterize and propagate annotations across fungi. Myco-Ed Genomics Initiative   …

Group applies cutting edge molecular capabilities and state-of-the-art next-generation sequencing to enable biological … The team works hand in hand with the Project Management Office to help ensure the JGI’s genomic capabilities are …

Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … about the basics of genome mining, which is using DNA sequence to identify and interpret biosynthetic, secondary … For sure. I mean, that goes all the way back to NCBI, gene annotations and ontologies and things that — things have …

The mission of the Joint Genome Institute is to serve the scientific community as a … … For sequencing projects, once work is under way, raw sequence data is released to NCBI’s Sequence Read Archive on … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …

… for bioenergy and bioproduct applications. The program has completed over 70 projects, including gene synthesis, … Program aims to generate large datasets to explore sequence-function relationships, advancing the discovery of … the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and …

… and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … based on scientific need. Proposals are considered complete when all agreed-upon projects are complete. This …

… of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to … of microbial communities based on their metagenome sequence, in the context of reference isolate genomes … novelties and expansions.  … The SMC provides complete sequence and annotation data for secondary …

… factors and determine their binding sites across multiple genomes. Computational prediction of heterologous … computational analyses of BGC size and complexity, BGC sequence composition, metabolic similarity & compatibility, … signatures of horizontal gene transfer. … The SMC provides complete sequence and annotation data for secondary …

… of your sequencing project at any time by logging on to the Genome Portals using your JGI login. After sequencing/metabolomics has completed, your Project Manager will initiate analysis with … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …