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JGI Advisory Committees Code of Conduct
Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to … publicly (e.g., in response to media requests, through social media channels); Coordinate messaging with the JLT, …
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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial genomes. And … And I think another key component is data integration with genomics with metabolomics and with transcriptomics because …
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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of … focused on the application of  function-driven single-cell genomics . Here, single cells are characterized and selected … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …
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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical … … The IMG/M system serves as a community resource for comparative analysis and annotation of all publicly …
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Microbiome Data Science Team
… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential … Other projects in the group include the sequencing and comparative analysis of thousands of archaeal and bacterial … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and functional … of genome and metagenome datasets in a comprehensive comparative context. The IMG data warehouse integrates …
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Institutional User Agreements
… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …
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Meeting Code of Conduct
All participants and staff of the JGI events are required to adhere to the following Code of Conduct. Event organizers will enforce this Code … event/conference — including talks, workshops, parties, social media or other online media. Following a Code of …
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Partnerships: Myco-Ed
Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology … through the links below. Naturalist Myco Ed Fungal Genomics Education Project MycoCosm MycoEd group page … annotation. … The Mycocosm portal supports the annotation, comparative analysis, and distribution of fungal genome …
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Offerings & Capabilities
The central mission of the JGI’s Genomic Technologies department is   ensuring … to focus on expanding molecular capabilities and functional genomics, scaling capacity through end-to-end automation, … and further advancing sequence applications, single cell genomics, DNA synthesis, and metabolomics.   … Deputy of …
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JGI Portals
… constant developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial … … The IMG/M system serves as a community resource for comparative analysis and annotation of all publicly … access, visualization, and analysis tools for comparative genomics of fungi. Mycocosm enables users to navigate across …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… as many as it did and how that became sort of a trend in genomics. So anyway, yeah, JGI has been working in secondary … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … a BGC fragment can be useful in some way if you’re doing comparative analysis. We want to make sure we had everything …
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