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… and anti-pest compounds.  The program is working to expand genomic resources for key plant species, enhancing our … The  Open Green Genomes (OGG) project seeks to develop comparative high quality genomes and annotations across the … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

… community as a user facility pioneering functional genomics to solve the most relevant bioenergy and … Science through high performance computing (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( KBase ) … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …

Software engineers in the Synthetic Biology Informatics Group … gRNA-SeqRET , an organism-agnostic CRISPR gRNA design tool BOOST , which provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination and Golden Gate …

Data produced and released by the US Department of Energy (DOE) Joint Genome … data. The JGI Data Policy applies to research data and analysis products (referred to as “data” for the remainder … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …

Metabolomics strengthens -omics technologies at the JGI by … environmental samples using advanced liquid chromatography mass spectrometry (LC-MS) based methods in combination with advanced computational analysis.   Overview of metabolomics products At JGI, …

… exploring how to convert sequence into functional assessments. This is done by synthesizing genes, pathways, … and novel automations for DNA design, assembly and analysis Overview of synthesis products The JGI DNA … enables users to validate hypotheses generated from mining genomic data by designing and assembling physical DNA …

The CSP Functional Genomics call is to enable users to perform state-of-the-art … genomic information into biological function.  The emphasis is on projects leveraging JGI’s DNA synthesis and … accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s …

… … DAN: Welcome back for episode 9 of Natural Prodcast. This … of system-wide problems. And it’s not just constitutional analysis as a problem, we need corresponding improvements in …

… workflow, and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and functional genomic data … of genome and metagenome datasets in a comprehensive comparative context. The IMG data warehouse integrates …

… a good catalog of what’s out there so that we can do more comparative analysis and maybe– I don’t know– start to put some of these … mechanistic enzymology to natural product biosynthesis to genomics to directed evolution– but it’s just the– it really …

… high-risk/high-payoff proposals within the focused topic areas that can be completed on an accelerated timeline as … accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …

… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential … Other projects in the group include the sequencing and comparative analysis of thousands of archaeal and bacterial … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …