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DNA Synthesis Science User Advisory Committee
… The DNA Synthesis Science User Advisory Committee is chartered … on the effective management and strategic objectives of the programs. The Committee serves as the Program's key external advisory panel and advocates of Program strategy, operations, and scientific relevance …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER … other and with their environment and help unravel these complexities  This ecosystem serves users better in the following ways: Data integration is critical to exploring research questions in a …
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User Support
… The JGI Project Management Office carries out a number of activities to facilitate … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs are also shipped at this time. Your Project …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… ( CRAGE ). CRAGE enables scientists to insert large pieces of DNA (up to 60 kb) in a single step, directly into the … the new system, CRAGE-Duet, can accommodate two DNA constructs, doubling the amount of DNA that can be inserted …
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Metagenome Program
… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … approaches to assess microbial activity across ecosystems.  By studying microbial communities and their … drive innovations that could advance our understanding of Earth’s ecosystems. …
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Synthetic Biology Lab
… The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic biology … as user facility that aims to provide access to state-of-the-art DNA synthesis and assembly technologies to the … such as those involving biosynthetic clusters, or high complexity combinatorial libraries.  We have developed and …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct … Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which …
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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, DNA … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … Program leads to discuss available options. Note: In 2021, we conducted an extensive internal product audit to …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative … collaboration with partner organizations such as the DOE Systems Biology Knowledgebase and the National Microbiome …
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New Lineages of Life Group
… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find … Exploring the fascinating world of giant viruses, which challenge our understanding of viral …
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Plant Microbial Interactions Group
… Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … and are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, … fungi, viruses. Resident viruses can be found in a myriad of bacterial strains, whereby they can modulate host …
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Protocols
… provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA preparation.  JGI sample QC protocols can be found here . DNA Extraction Protocols: … Tips for High Molecular Weight DNA extraction: …
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