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Natural Prodcast Episode 10: A Primer on Genome Mining
… DAN UDWARY: You’re listening to the Department of Energy … and scientists of secondary metabolism. Welcome back for our second season of Natural Prodcast. This first … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …
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Natural Prodcast Episode 16: Marcy Balunas
… DAN: Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … in. And there is quite a bit of sun and exposure to solar radiation with refraction through the ice.  DAN: What’s your …
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Natural Prodcast Episode 11: Marnix Medema
… Dan Udwary: You’re listening to the Department of Energy … genome miners use, including antiSMASH, MIBiG, and newer efforts, like BiG-scape and BiG-SLiCE, and now the BiG-FAM … I think this is really– I personally like this really as a model for a collaboration. You have your code as open source …
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Institutional User Agreements
… Every approved proposal starts with a User Agreement — before any work can begin, including the submission of samples for … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … Agreement for Federal Agencies , DNA Synthesis Appendix  and DNA Sequencing Appendix are available for download.) …
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Natural Prodcast Episode 4: Nancy Keller
… DAN: You’re listening to the US Department of Energy Joint … to Natural Prodcast! This is episode 4! From here on out, for a while, we’re going to be presenting some conversations … more interested just to see if we can use Aspergillus as a model for expressing hard to work with eukaryote [genes]. So …
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Natural Prodcast Episode 14: Nigel Mouncey
… DAN: Hello, everyone, and Welcome back for Episode 14 of … as the fermentation process itself. And we built a nice modeling feedback loop for the fermentation work, which … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Examples: Successful LOIs & Submissions
… See below for examples of successful Letters of Intent to our Community Science … Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating Collaborations for User Science … lignin engineering to drought stress resilience: RNA-seq and metabolomic insights in lignin biosynthetic pathway …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint … of secondary metabolism.  DAN: Hello, and welcome back for Episode 7 of the Natural Prodcast. It’s been about a … traditional limitation for natural products –  say if we originated, say, taxol, for example. If you say isolate …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from candidate phyla, major branches in the phylogenetic tree …
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Natural Prodcast Episode 19: Bill Fenical
… DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the opportunity to talk to one of … early on. So here we go. So maybe we start with what’s your origin story in natural products? How did you get started in … Episode Transcript … legendary Prof William Fenical of Scripps Institution of Oceanography in San Diego about the beginnings of marine …
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Secondary Metabolites Program
… Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which are not essential for fundamental growth, provide critical advantages to the … The Secondary Metabolites Program targets the vast and underexplored reservoir of secondary metabolites …
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Microbial Program
… Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … inter-organismal interactions. These insights are crucial for addressing key environmental challenges, such as …
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