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… the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also seeks out new … microfluidics/microdroplet technology in order to enhance the quality of single-cell genomes and directly link … uniquely offers the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal …

… Research in the Woyke laboratory focuses on the utility of … taxa of interest. One such effort is targeted at environmental cells that are from candidate phyla, major branches in the phylogenetic tree … genomes are critical to serve as phylogenetic anchors for metagenomes studies.  While uncovering the metabolic …

… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and … interactions. These insights are crucial for addressing key environmental challenges, such as improving soil health, … The Microbial Program focuses on using advanced sequencing technologies to explore microbial …

… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that really got …

… The Facilities Integrating Collaborations for User Science (FICUS) call … opportunity for researchers to request the capabilities and expertise of multiple DOE National User Facilities in … provides customized analysis, the JGI also participates in publication of results. …

… approved proposal starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … the Contracts Officer will send required paperwork to your institution. (Samples of the JGI User Agreement , JGI User …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … that easily can identify secondary metabolite pathways in metagenomes, which is still hard to do. We are mining a lot …

… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by … and evolutionary parameters driving virus:host dynamics in environmental microbial communities. This involves both … and virus genomes have been assembled and reported from metagenomes, our understanding of the impacts of these …

… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, Biodesign and pathway … Q1  (median/75th percentile*) DNA Synthesis Constructs <5kb in size Single gene or multiple small genes assembled to … metabolites and unidentified features in spectra. 167/214 Metagenome Metatranscriptome Environmental transcript …

… for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from … in an obvious way. NIGEL MOUNCEY: We did a little bit of metagenome screening work and did find related clusters. But … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …

… Protein annotations provide insights into environmental tendencies The Science The  Metagenome Stability Diagram — a tool within the Integrated … The work conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office of …

… Data produced and released by the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data … (FICUS) initiative, Director’s Science (DS), Biological and Environmental Research Support Science (BERSS), or Bioenergy … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way …