Search

… DAN UDWARY: Hey, everyone. I’ve got a great episode for you … now. My perception is that a lot of that competition was driven by drug discovery and the money that’s available … in the process. We now have cell pellets. And we’re pulling genomic DNA out of those cell pellets. So, we’re about ready …

… DAN UDWARY: You’re listening to the Department of Energy … whole idea of NaPDoS , this computer program which uses phylogeny to predict compounds. And so I really had to dig … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …

… Large-scale comparative analysis leads to identification of … knowledge. In a study published November 11, 2022, in Cell Genomics , the team focused on Actinobacteria ( … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …

… Dan Udwary: You’re listening to the Department of Energy … into 100, for example, sub domains”, where he made a big phylogeny of all the proteins that had the protein domain. … of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial genomes. And …

… Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including … Plant microbiomes hold the amazing ability to influence plant …

… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … or secondary metabolism, has been … not dominated by, but driven by drug discovery. We know that many natural product … Episode Transcript … This the second episode of Natural Prodcast, which continues a conversation from the …

… The Joint Genome Institute and the Molecular Foundry have launched a joint Critical … for researchers to request the capabilities and expertise of both national user facilities in one research proposal.  Submit research proposals  here that integrate genomics with nanoscale science, accelerating discoveries …

…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which … The Secondary Metabolites Program targets the vast and underexplored … The Secondary Metabolites Program offers users extensive genomics, biodesign and metabolomics capabilities to …

… JGI Mission As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, large-scale AI-ready data and … managing our people and resources. Our vision is to lead AI-driven genomic innovation to advance biotechnology.   …

… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … that. So yeah. AARON PURI: Yeah. It can be very question-driven. It’s not a bunch of people who have hammers that are … Episode Transcript … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … I think the important thing to remember is that, thanks to genomics, we now know that it is very hard to find stuff … Episode Transcript … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …