Search

Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi, again. This is Dan, and … and ergot alkaloids come from fungi, and Taxol from plants. Plants, fungi, bacteria, archaea, they all have … an example. One of the organisms that I studied in the past were a group of bacteria called the Frankia . And so …

… to people, but you’ve worked with some cool people in the past. So you want to tell the audience about those? JACLYN … are familiar with JGI’s IMG data portal , the Integrated Microbial Genomics, there was a subsection of that called … And so we also sequence a lot of fungi, and we sequence plants. And so we started thinking about if we had a …

… drive innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, and DNA Synthesis Science Programs …

… curator there, with a broad range of experimental work on plants for drug discovery in antibiotics, anticancer, and … that we found, indeed, that both formulations had some antimicrobial properties. But the one that was used in … can find all of that information on virtual and in-person events again on my website. You can also– I’d also encourage …

Plants are complex organisms that harbor a fantastic … including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … how plants self-organize, influence, and are influenced by microbial partners. We use a variety of genomics-powered …

… about natural products and the science and scientists of secondary metabolism. Natural products, secondary metabolites, and specialized metabolites all refer to the …

… about natural products and the science and scientists of secondary metabolism. Welcome back. This will be episode 12 … need the community to be able to come together. And in the past, we’ve had these monolithic databases, NCBI and IMG , … transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to …

The Plant Program Advisory Committee is chartered to offer … on the effective management and strategic objectives of the plant program. The committee serves as the program's key …

… been dead center and a lot of the really important recent events in data analysis and secondary metabolism over the … IMG kind of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial … called “disease suppression”, where the microbiome of a plant, so the bacteria living on and inside the roots are …

… to do an independent study on ethnobotany of some of the plants that people were using for medicines in this very … tell us about this squid-microbe relationship. Or is it a microbial community with microbial community relationship?  … so my collaborator and I have this idea that they work like pastry bags almost and so they are essentially squeezed out …

… analysis Relative abundance profiling of non-polar (e.g. secondary metabolites, lipids, etc) metabolites using … physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial … contigs. Assembly, annotation ( IMG ) Depends on project Plant and Algal Standard Draft Whole genome shotgun …