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… target is based on 98% of the total available hours.   FY 2017 DOE Metrics 1,598 unique* JGI users in FY2017 … Q1 – Report on new computational developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on …

… the special, natural chemical compounds that you find in plants, fungi and bacteria, basically all living things. … right. So I did a PhD in microbiology at MIT, and I studied microbial ecology. I studied Vibrio species in the ocean, so … products that would cause some, you know, major historical events and craziness in human history.  ALISON: Yeah, that …

… in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … Woyke T ., Doud D. F. R., Schulz F. The trajectory of microbial single-cell sequencing. Nat Methods 14(11): 1045-1054 (2017). Schulz F., Yutin N., Ivanova N. N., Ortega D. R., Lee …

… of complex biological, earth, and environmental systems for energy and infrastructure security. In … drive innovations that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, …

… of the role small molecules play in diverse biological systems, sheds light on nutrient cycling, and leads to the … At JGI, in-depth molecular profiles are generated for metabolites extracted from a variety of experimental … samples, including organisms (e.g. microbes, fungi, plant), media in which they grow, as well as different types …

… curator there, with a broad range of experimental work on plants for drug discovery in antibiotics, anticancer, and … that we found, indeed, that both formulations had some antimicrobial properties. But the one that was used in … can find all of that information on virtual and in-person events again on my website. You can also– I’d also encourage …

… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi, again. This is Dan, and … and ergot alkaloids come from fungi, and Taxol from plants. Plants, fungi, bacteria, archaea, they all have … an example. One of the organisms that I studied in the past were a group of bacteria called the Frankia . And so …

… to people, but you’ve worked with some cool people in the past. So you want to tell the audience about those? JACLYN … are familiar with JGI’s IMG data portal , the Integrated Microbial Genomics, there was a subsection of that called … And so we also sequence a lot of fungi, and we sequence plants. And so we started thinking about if we had a …

… about natural products and the science and scientists of secondary metabolism. Welcome back. This will be episode 12 … need the community to be able to come together. And in the past, we’ve had these monolithic databases, NCBI and IMG , … transcriptomics, metabolomics, and natural products in plants, fungi, and microorganisms. If you want to …

… been dead center and a lot of the really important recent events in data analysis and secondary metabolism over the … IMG kind of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial … called “disease suppression”, where the microbiome of a plant, so the bacteria living on and inside the roots are …

… of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … within those genomes. Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of microbial communities and ecosystem function.  The …

… about natural products and the science and scientists of secondary metabolism. Natural products, secondary metabolites, and specialized metabolites all refer to the …