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Natural Prodcast Episode 7: Ben Shen
… schedule for a while. Moving forward, I’m hoping to get a new one out every two weeks. This time, we’ve got a great … group to work on sequencing, synthesis and genome mining technology to help access complicated natural product gene clusters, and we’re … to sequence that collection, mine genomes, and develop new technology to access natural products.  You can find the …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER data … where data from different organizations is discoverable and accessible. Linking the resources of powerful institutions … exciting possibilities for scientific exploration, granting access to diverse datasets that deepen our understanding of …
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Micro-Scale Applications Group
… Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also seeks out new approaches that utilize microfluidics/microdroplet technology in order to enhance the quality of single-cell …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… have a better understanding of what is what. This is not new. It actually was first proposed by two authors called … features of the compound. For example, lipids– doesn’t matter if it has one extra carbon or two or one less, at the … move a little bit away from that to try to unmask chemical dark matter. And the idea behind this is that, if we …
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Offerings & Capabilities
… Genomic Technologies department is   ensuring users have access to cutting-edge capabilities to help advance their … in strain engineering and functional assays and supporting new methodologies to enhance the integration of various data …
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FICUS
… but proof of concept for the demonstration of a technology that would be applicable to DOE mission is … being lack of relevance to DOE mission areas.  Initiate a new LOI by logging into the   EMSL User Portal  and clicking … Accessing Resources at Multiple DOE User Facilities with a …
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Plant Microbial Interactions Group
… including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … how plants self-organize, influence, and are influenced by microbial partners. We use a variety of genomics-powered …
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Natural Prodcast Episode 14: Nigel Mouncey
… natural products for agriculture, and his upcoming new role as the Society for Industrial Microbiology and Biotechnology’s (SIMB) new President-elect. I also want to take … to thousands at a time and do this so that we can not only access just new diversity, but actually go and explore it …
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Environmental Genomics Group
… of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … within those genomes. Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of microbial communities and ecosystem function.  The …
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Natural Prodcast Episode 4: Nancy Keller
… example of probing fungi for natural products and finding new things. And so, really happy to have you here. And … of the food was bad from mold, but that’s all I really knew. I didn’t really think about it a lot. And so after I … not that hard. I mean, technically, you know, it’s not very accessible.    NANCY: They’re not at all. It’s not. It’s …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… interviews, but instead it’s two interviews in one. My new co-host, Jackie Winter, has been on a few episodes now, … natural products but just different tools and how to really access and manipulate these pathways to get new compounds. … are familiar with JGI’s IMG data portal , the Integrated Microbial Genomics, there was a subsection of that called …
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Metabolomics Program
… exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With … systems can provide novel insights into the impact of microbial symbionts and their hosts on ecosystems.   … designed to demystify the complexity of dissolved organic matter (DOM) across a variety of environments. ENVnet allows …
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