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How to Submit Sequencing Samples
Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? … samples move through QC and into the library and sequencing pipelines.  You will receive automated emails as raw … metadata such as the project name, current status, NCBI & JGI taxonomy, and data locations on the various JGI …
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User Support
… execution by: Metadata verification and coordination with IMG , GOLD and others for data annotation and submission …
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CSP Functional Genomics
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CalTeach
… educational theory and promoting diversity, equity, and inclusion, with concurrent field work in local classrooms …
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Micro-Scale Applications Group
… technology in order to enhance the quality of single-cell genomes and directly link functional information with … quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal analytical standards to … DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling …
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Fungal & Algal Program
… and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … culture collections to produce hundreds of diverse algal genomes, which will be made accessible through the PhycoCosm … for microbial eukaryotes, build fungal and algal pangenomes, and integrate multi-omics tools to enhance …
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Synthetic Biology Informatics Group
… which track samples through the JGI’s Synthetic Biology pipeline as well as provide process automation support …
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Natural Prodcast Episode 14: Nigel Mouncey
… work to link all this together and try to build a seamless pipeline that takes us through these different capabilities. …
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IMG 4 version of the integrated microbial genomes comparative analysis system
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IMG: the integrated microbial genomes database and comparative analysis system
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Plant Program
… and environmental sustainability. … Plant Flagship Genomes are selected through discussion with the JGI Plant … Advisory Committee and DOE, designating a set of JGI plant genomes that are the most important to DOE mission and plant … datasets to further gene function research. The  Open Green Genomes (OGG) project seeks to develop comparative high …
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IMG ER: a system for microbial genome annotation expert review and curation
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