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Secondary Metabolites Program
… can unlock new avenues for bio-based products and bioenergy crop enhancement. The program aims to tap into the … of new bio-based molecules that can drive innovations in bioenergy, sustainable agriculture, and other fields reliant … production to improving the resilience and productivity of bioenergy crops. …
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Microbiome Data Science Team
… a major transition of biology into data science.  Research in the Kyrpides group focuses on Microbiome Data Science and analysis of Big Data. The Research Team   … The research efforts of the group have concentrated in … challenges in Biology, with a special focus on microbiome research.  These efforts include exploration of the global …
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Plant Program
… renewable energy and agricultural productivity. Research spans diverse areas — from understanding how … analysis. Additionally, the Plant Program is advancing research into plant-microbiome interactions, focusing on how … technologies and data-driven methods, the program equips researchers worldwide to tackle challenges in energy, …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… him about more recent work like ActDES, which is a curated database of actinobacteria for evolutionary studies, and … often end up realizing that what is defined by the KEGG [database], for example, is not enough even there. So it’s … observation of the work of anybody who has been doing research in this field– is that that’s true for one compound …
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Who We Are
… Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative Genomics … by the DOE Office of Science's Biological and Environmental Research program, the JGI integrates the genomic … and contributing this information freely to the public databases. In 2004, the JGI established itself as a national …
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Natural Prodcast Episode 7: Ben Shen
… we’ve got a great interview with Ben Shen, from the Scripps Research Institute in Jupiter Florida. This interview is … ancient times! We know how to ferment beers or wines or rice liquors etc. So, by sequencing the genome of … so everybody, readers of the library, can come to our databases and look for the specific information they are …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using … Genomics group also hosts the Viral Genomics group . Research Team    … Our research focuses on the assembly of metagenomic sequence … Our research focuses on the implementation of prokaryotic … samples, such as those from soil and plants, our group researches the use and implementation of machine learning …
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Data Policy
… by those generating data. The JGI Data Policy applies to research data and analysis products (referred to as “data” … Director’s Science (DS), Biological and Environmental Research Support Science (BERSS), or Bioenergy Research Centers (BRCs). Overview … Read about our policy on research data and analysis products produced through all …
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New Lineages of Life Group
… Our research is focused on the discovery and characterization of … may impact microbiome structure and biogeochemical cycles. Research Team    … our understanding of viral complexity and evolution Our research focuses on discovering and characterizing giant … fluids to hypersaline lakes and hyperthermal springs. This research provides insights into the limits of life and …
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Natural Prodcast Episode 11: Marnix Medema
… efforts, like BiG-scape and BiG-SLiCE, and now the BiG-FAM database of biosynthetic gene cluster families. And he tells … was working on a natural products/biosynthetic gene cluster database, and a tool for predicting natural product … I wish I could use this tool. I don’t have this kind of research area though, so. Dan Udwary: You can, Alison, …
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Data Ecosystem
… following ways: Data integration is critical to exploring research questions in a comprehensive, multi-disciplinary … through our systems, we build far-reaching communities of researchers to bring down barriers to productivity.   … KBase are designated DOE Office of Science Public Reusable Research (PuRe) Data Resources are authoritative providers …
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A Community Resource for Secondary Metabolite Researchers
… gene clusters (BGCs.) As reported in the recent Database issue of the journal Nucleic Acids Research , the Secondary Metabolism Collaboratory (SMC) has launched as an interactive public database for the research community. With more than 13 … SMC is the most comprehensive BGC database available at 10X the scale of the closest …
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