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Projects
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… proposal.  Submit research proposals  here that integrate genomics with nanoscale science, accelerating discoveries … or differential gene expression results. For DNA synthesis projects, JGI ships physical materials like expression … to the user project (such as chemicals, basic lab supplies, office supplies) is supported by the Foundry. If a user’s …
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Biodesign
… Biology Lab : a user science group dedicated to user project design, assembly, and quality control Strain … : a team that develops data science tools for workflow management and novel automations for DNA design, assembly and analysis Overview of biodesign … Synthesis Platform Lead …
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FICUS
… an accelerated timeline as compared with the standard CSP projects. In addition, they must utilize a broad range of … of these facilities could generate by itself.   Accepted projects must address or be otherwise mission-aligned, but … mission is appropriate. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for …
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How to Submit Sequencing Samples
… the process. If you have any questions, please contact your Project Manager or jgi-project_management@lbl.gov . … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting step for many projects at the JGI. The quality of the starting material is …
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Industry Engagement Program
… to test hypotheses via designed and assembled physical DNA constructs that can then be functionally characterized.  … in partnership with Berkeley Lab’s Strategic Partnerships Office and Intellectual Property Office to execute agreements. Learn more about partnering …
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Microbiome Data Science Team
… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology advances in management, processing and visualization of “big data,” and … of genomes from uncultivated microbes (Nature 2019). Other projects in the group include the sequencing and comparative …
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JGI-TMF Critical Minerals and Materials Call
… The program seeks research proposals that integrate genomics with nanoscale science, accelerating discoveries … minerals and materials. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for … to DOE for final approval. Following DOE approval, project managers negotiate project specifics with PIs …
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FICUS-NERSC/KBASE
… community as a user facility pioneering functional genomics to solve the most relevant bioenergy and … ( NERSC ) is to accelerate scientific discovery at the DOE Office of Science through high performance computing (HPC) … the Letter of Intent; rather proposals are submitted in a single step. …
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User Support
… including a Login Walkthrough and FAQ . –– The JGI Project Management Office carries out a number of activities to facilitate …
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CSP Functional Genomics
… The CSP Functional Genomics call is to enable users to perform state-of-the-art … information into biological function.  The emphasis is on projects leveraging JGI’s Biodesign and ‘omics capabilities … are reviewed annually. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for …
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Environmental Genomics Group
… communities and ecosystem function.  The Environmental Genomics group also hosts the Viral Genomics group . Research Team    … from labeled nutrients into biomass. When paired with metagenomics, qSIP can decipher active microbial functions in … colleagues, to quantify heavy isotope incorporation into DNA by active microbial populations (Hungate et al. 2015). …
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