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… of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … within those genomes. Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of microbial communities and ecosystem function.  The …

GEBA-type strains project ), the delineation of host-virus interactions, the exploration of the functional dark matter … A global metagenomic map of urban microbiomes and antimicrobial resistance. Cell . 184(13):3376-3393 Almeida A, et … et al. (2016) Microbiome Data Science: Understanding Our Microbial Planet. Trends Microbiol. 24(6):425-7. …

… parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and … of green sulfur bacteria with long standing virus-host interactions. ISME J.   15 , 1569–1584 Roux, S. et al. …

… in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … Kyrpides N. C., Woyke T . Giant virus diversity and host interactions through global metagenomics.” Nature 578(7795): … Woyke T ., Doud D. F. R., Schulz F. The trajectory of microbial single-cell sequencing. Nat Methods 14(11): …

… physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial aggregate, or a specific subset of free-living … sample, annotation ( IMG/M ), binning Depends on project Microbial Minimal Draft, Isolate Draft quality microbial …

… of thought with that. So some people are interested in cave microbial– people are interested in the more extreme … in the cave project just now switching from intermicrobial interactions, studying intermicrobial interactions …

IMG kind of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial … gene clusters are more highly abundant in the suppressive soils compared to the conducive soils? So which ones are … that the expression of these gene clusters play in these interactions. But also things like trying to predict at …

Program aims to streamline genome analysis workflows for microbial eukaryotes, build fungal and algal pangenomes, and … The program also explores microeukaryotic members of microbial communities, cataloging gene markers, and …

… 255-255 Schulz et al. (2020) Giant virus diversity and host interactions through global metagenomics. Nature. 578 …

Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge … To provide additional functional insights into microbial genomes, the JGI now uses laser microdissection to selectively isolate and sequence microbial aggregates after first imaging with various …

… algae and plants. These compounds are key to organisms' interactions with their environments and with each other, …