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… exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With … to link metabolic activity with gene expression, providing deeper insights into functional genomics. A key focus is … systems can provide novel insights into the impact of microbial symbionts and their hosts on ecosystems.   …

Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … how plants self-organize, influence, and are influenced by microbial partners. We use a variety of genomics-powered …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for … Program aims to streamline genome analysis workflows for microbial eukaryotes, build fungal and algal pangenomes, and … The program also explores microeukaryotic members of microbial communities, cataloging gene markers, and …

…   Visualizing a novel, candidate viral genome found in the deep subsurface ecosystem. The Science Altiarchaea are … Earth’s surface is reconstructed by combining a study of microbial communities (metagenomics) and a chemical … that indicate repelled attempts to infect and lyse the microbial cells. This demonstration of the virus-host arms …

… at Colorado State University have many questions about the microbial communities deep underground, and before the pandemic, they took the JGI …

Metagenomic datasets could help map out microbial diversity hotspots Over the past few decades, advancements … to curate and cultivate what is still unknown.  “We took a deep dive into over 1.8 million bacterial and archaeal …

Microbial communities living near hydrothermal deep-sea vents hold vast potential for bioenergy.   The … these vents, and underwater volcanoes,  researchers studied microbial communities across five oceanic regions. In doing …

… of thought with that. So some people are interested in cave microbial– people are interested in the more extreme … have to do a 10,000-fold dilution to plate that out. The deeper you go in the cave, the less dilution. You can be … was less nutrients but enough that you had a lot of biodiversity. So we choose environments that are close enough …

… in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … still persists to date. Research Team    … Phylogenetic diversity estimates show that the gap between cultivated and … Woyke T ., Doud D. F. R., Schulz F. The trajectory of microbial single-cell sequencing. Nat Methods 14(11): …

… especially for these primer episodes, if you want to dive deeper on all this at http://naturalprodcast.com . And then … Yeah, bacteria sound like a good place, to me, to look for diversity because there are so many bacteria, because it is … of the IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial …

… with 86 participants in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or … workshop aimed to showcase how researchers are utilizing deep learning to automatically generate insights from … Lab’s Biological Systems and Engineering), to assign microbial taxa (Andrew Tritt of CRD and, independently, Ying …