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Metabolomics Program
… with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular level. … exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With … systems can provide novel insights into the impact of microbial symbionts and their hosts on ecosystems.   …
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Partnerships: Adopt-A-Genome
… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will … by the Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though … of genome scientists and recruit new talent for biosciences.  Adopt-a-Genome has: ~20 faculty from institutions …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… features of the compound. For example, lipids– doesn’t matter if it has one extra carbon or two or one less, at the … move a little bit away from that to try to unmask chemical dark matter. And the idea behind this is that, if we … in partnering with us, we want to hear from you. We have projects in genome sequencing, DNA synthesis, …
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Natural Prodcast Episode 18: A CSP Primer
… is kind of like a CSP, but you would be proposing a larger project that requires the work of two or more DOE user … the user programs at the JGI, and I’m also the head of the microbial genome program. And I’m a scientist here. And have … notes. Anyone, anywhere is eligible! Nationality doesn’t matter. Generally established academics or teams of them are …
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Products
… a proposal, we encourage you to contact the relevant JGI  Science Program leads to discuss available options. Note: In … choice Glycerol stock of sequence verified clone depends on project DNA Synthesis Combinatorial libraries Multiple genes … physical separation of a biologically relevant unit from a microbial community, such as a microcolony, microbial …
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Environmental Genomics Group
… of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … within those genomes. Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of microbial communities and ecosystem function.  The …
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Plant Microbial Interactions Group
… including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … how plants self-organize, influence, and are influenced by microbial partners. We use a variety of genomics-powered …
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New Lineages of Life Group
… Cataloging Earth's microbial lineages through advanced genomic techniques and … reveal new lineages and functional capabilities in the microbial world. … A.I., Mars Brisbin, M., Hu, S.K. et al. (2024) “ Missing microbial eukaryotes and misleading meta-omic conclusions …
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Data Policy
… for the remainder of this policy) produced through all user projects accepted FY22 and later through the Community Science Program (CSP), Facilities Integrating Collaborations for User Science (FICUS) initiative, Director’s Science (DS), … For sequencing or metabolomics projects: data are subject to a  one-year embargo .  For …
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DNA Synthesis Program
… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … bioproduct applications. The program has completed over 70 projects, including gene synthesis, combinatorial pathway … to refactor entire chromosomes, such as a yeast chromosome project. These advancements contribute to the development of …
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Mission
… JGI Mission As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic … innovation in energy, materials, and manufacturing. Genomic science lies at the heart of biology, providing the … crops, enhance biomass conversion efficiency, and discover microbial pathways for producing biofuels, biochemicals, and …
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Fungal & Algal Program
… Program aims to streamline genome analysis workflows for microbial eukaryotes, build fungal and algal pangenomes, and … The program also explores microeukaryotic members of microbial communities, cataloging gene markers, and … genomes to support both basic research and applied science. By advancing fungal and algal genomics, the program …
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