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Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it going?  DAN: Good. How are you?  MARCY: Am fine. I live in a … now?  MARCY: Sure. So my lab has really converged on the study of host-microbe chemistry. And the interactions– As … Marcy. So I was wondering, how did you get interested in studying natural products?  MARCY: That is a great question …

… to onboard users and guide them through the process of working with our facility. This includes help with: preparing a Statement of Work, completing a formal User Agreement, …

Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … Clum, A. et al. (2021)  DOE JGI metagenome workflow …

… the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and … sends Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your …

Research in the Woyke laboratory focuses on the utility of … genomes are critical to serve as phylogenetic anchors for metagenomes studies.  While uncovering the metabolic … information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. …

Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for … with existing transportation fuels. Researchers also study ways to develop valuable byproducts from lignin left … State University in East Lansing, Michigan. This center is studying a range of plants and, in addition to exploring …

… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s … what was this bacterium, and why did your group want to study it? Marnix Medema: You mean the PhD project that I … primer episode, we talked about genome mining through some metagenome associated genomes. And yes, antiSMASH is …

… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … supports the development of next-generation biofuels by studying perennial grasses and fast-growing trees as … It is now available for both eukaryotic and microbial metagenome assemblies. It is also available as an app in …

… fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial … partners. We use a variety of genomics-powered tools to study this complexity, including single-cell and spatial …

Journal publication caps JGI pilot project with fledgling Florida high school scientists. The Florida Everglades … system, reached  Emiley Eloe-Fadrosh , who heads the  Metagenome Program . “After discussing the project with him, … this because we have the resources as a user facility. The Metagenome Program team provided guidance and encouragement …

Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in … Scripps Institution of Oceanography. She stepped into the Metagenome Program Lead position in 2017. She also leads the … UCSD Undergraduate Scholarship, 2003 and 2004 UCSD Study Abroad Scholarship (James Cook University, Australia), …

… and strategic objectives of the JGI. The SAC serves as the Institute's key external advisory panel and advocate of the Institute's strategy, operations, and scientific relevance … of the committee is to take the input from the CSP Proposal Study Panel on prioritization of CSP projects and, with …