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Natural Prodcast Episode 14: Nigel Mouncey
… 14 of Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from here I can get … lying around at home. And I would just pick them up and look at the pictures for a while. And then I was able to … we’ve done a lot on our spinosyns. We had a huge amount of learnings to apply to this second product, the UK2A base …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … stuff that is universally conserved. No matter what you look at, we will always find a new way on how to do the … Dr. Francisco (Paco) Barona- Goméz is a Principal Investigator at Cinvestav UGA-Langebio in Irapuato, Mexico. His …
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Fungal & Algal Program
… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, … sequencing technologies and advanced genomic analysis to explore the rich diversity of fungi and algae. These …
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Natural Prodcast Episode 17: Cassandra Quave
… Prodcast episode 17. The guest we have this week is Professor Cassandra Quave from Emory University, with joint … and Sciences. She’s an ethnobotanist and the herbarium curator there, with a broad range of experimental work on plants … work in natural products, you’re going to get a great look at the intersection of traditional medicines and …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist … viral diversity, understand the role of viruses in natural ecosystems, and functionally explore viral genetic …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural … a great, fun bunch of little shows lined up, and I’m really looking forward to getting them out to you all. But for now, … put out some software called DeepBGC , which is a machine learning tool that tries to look at patterns of Pfams …
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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting …
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Industry Engagement Program
… than 2,500 users that predominately come from the public sector: academic and government institutions — with … that had remained largely unknown and underutilized by industry. When Director Nigel Mouncey joined the JGI in 2017, he brought with him 20 years of industry experience — and an opportunity to expand the …
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Natural Prodcast Episode 23: Aaron Puri
… now I’m working on this the afternoon of the day I’m due to release it, which is not ideal for me keeping myself on … going in the future. So, then we were using these probes to look at host pathogen interactions mostly with like enteric … going– I think it’s going back to the basics and really learning about basic biochemistry and what we can glean from …
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Secondary Metabolites Program
… Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and plants. These molecules, … for fundamental growth, provide critical advantages to the organisms producing them, and are often involved in … bacteria, fungi, algae and plants. These compounds are key to organisms' interactions with their environments and with …
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Natural Prodcast Episode 16: Marcy Balunas
… in natural products right. There’s many different avenues toward chemistry. But that’s kind of where I had you. How … products chemists and biologists, natural products folks, looking at the tropics because of this immense amount of … noise from the metabolomics data. We’ve done a lot of work learning about how to use statistical analysis to prioritize …
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Sequencing Technologies & Products
…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our … An assay used for profiling transcription factor binding sites across entire genomes. This technology has …
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