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Natural Prodcast Episode 20: Brian Bachmann
… in the early 2000s called Ecopia, which was a very early genome mining company, back when DNA sequencing of natural … out for sequencing. BRIAN BACHMANN: That’s right. And then just– and then in terms of there’s sequencing an organism by … amenable to work with, or even strains. And I think then it lends more to microbiology. And the more we have, the more …
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … ’80s. And then the first time we saw the structure that Dan just described to you. So the enediyne referred to two … natural product – they also often surprise us by giving us insights, inspires us to discover the fundamentals and then …
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Natural Prodcast Episode 2: The Primer, Part 2
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … do. So, that’s also common as well. And yeah, so it really just depends on lifestyle.  ALISON: Okay. It’s such a … bacteria provide nutrients for the plant mainly by fixing nitrogen. Getting nitrogen from the environment so that the …
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Mission
Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, … see below.  … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a DOE Office of Science User … Building in the heart of the Berkeley Lab campus, atop the hills above Berkeley, California and operated by the …
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Plant Program
… the vulnerabilities of monocultures and the benefits of nitrogen-fixing nodules in legumes, which can reduce … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is … communities affect plant growth and productivity. These insights have the potential to inform strategies that …
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Single Cell Research Group
… in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … means to begin filling this gap. A primary goal is to get  insights into the coding potential of candidate phyla  to … relationships and to provide valuable reference genomes in under-populated areas of the tree of life, as …
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Natural Prodcast Episode 6: Marc Chevrette
You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … that creates the DNA sequence. ALISON: Okay. And so maybe just to back up, because you started talking about the … to go in the next couple years. And hopefully, some of the insights that we glean from that will be broadly applicable …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … take for granted nowadays. You know, at that time, it was just [that] the chemistry of organisms was fascinating to … it turns out, you know, high CO2. Turns out you know, when nitrogen levels change in the ocean, you begin to see those …
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JGI Portals
… of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all researchers. … clade-specific orthology/paralogy relationships as well as insights into clade-specific novelties and expansions.  … …
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Natural Prodcast Episode 12: Nadine Ziemert
UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … it’s too late. They should be asleep already. But we’re not just here to talk about us. We have a great person to talk … lab, I love the topic, and I think what I like the most is just the interdisciplinarity of it. So it wasn’t only …
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Annotation and sequence diversity of transposable elements in common bean (Phaseolus vulgaris)
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Natural Prodcast Episode 13: Francisco Barona Goméz
UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a podcast about natural … this is all explained in detail, so if you’d like a link, just check out the show notes above or at … be useful. The community– we should say that. I mean, we just proposed something, and if people find it useful then …
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