Search

Doering and Bryce Foster and too many others to name at JGI for the last two years or so. SMC is now released and … you for that. And you had to put up with me as a young grad student. Oh, my gosh, I’m sorry. DAN UDWARY: Oh, no, no. … a subsection of that called ABC, the Atlas of Biosynthetic Clusters. And at the time, it was a really good resource for …

… of cultivated bacteria, still persists to date. Research Team    … Phylogenetic diversity estimates show that the gap … Bacteria and Archaea has steadily been widening since 2005. This gap is also reflected in the strongly biased … R.I., Pennacchio L.A., Tringe S.G., Visel A., Woyke T ., Wang Z. & Rubin E.M. Metagenomic discovery of …

… and now the BiG-FAM database of biosynthetic gene cluster families. And he tells us about forthcoming efforts … because I was bound to do something else. I was a Master’s student at the University of Groningen and then I wrote my … of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is …

… and Toxicology at the University of Utah. Jackie was a grad student while I was a postdoc at Brad Moore’s lab , went on … you can always find at naturalprodcast.com or through the JGI website at jgi.doe.gov . There’s a lot more to talk … unpublished at that point. But people would push out gene clusters maybe once a month at most. Maybe twice a year, a …

… let me know! I’m dying to hear from you. Toss an email to  jgi[email protected] , or leave us a review on Apple Podcasts … perspective, JGI has a large database of biosynthetic gene clusters and biosynthetic gene cluster fragments, and all … and just roll up our sleeves and you force your grad students to work on it for another week? Or do we need some …

… and head of the Secondary Metabolites Science Program at JGI, and also my boss, Nigel Mouncey. I got him on to talk … And so both of these are fermentation products, and so my team, we were responsible for coming up with new strains and … little bit of looking at spinosyns trying to find related clusters at Warp Drive, which I can say we didn’t. So–  …

… with my co-host Alison Takemura, who’s moved on from JGI to do real journalism, and we wish her all the best. … You can be in any career stage. Now if somebody is a grad student, it’s important to have submitted within the … comes out of it, if you start looking at biosynthetic gene clusters, you may find a wealth and some really interesting …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the … Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The Integrated Microbial Genomes group is focused … for nearly 28,000 bacterial and archaeal genomes. By clustering genomes based on their pairwise AF and ANI …

… describe. [ Go here to learn more about Tiny Earth and the JGI’s role in the project by watching Amanda Hurley’s … to provide a semi-regular forum for postdocs and graduate students through Natural Prodcast, especially those who have … papers [on] recently – on evolution of biosynthetic gene clusters. And you and I have had some arguments over beers …

… be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. … All data is made publicly available in accordance with  JGI’s Data Policy . In cases where the JGI provides … available from all the facilities participating in the FY25 call, introduces the resources available from the …

Originally conceived as a UC Merced graduate student summer research experience at the JGI, the Genomics Internship Program soon expanded to … students have contributed to the research of numerous JGI scientists. Interns say their experiences allowed them …

College to see EcoFABs in action in Jill Bouchard’s BIO 21 lab course. …