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Natural Prodcast Episode 14: Nigel Mouncey
… and head of the Secondary Metabolites Science Program at JGI, and also my boss, Nigel Mouncey. I got him on to talk … .  And that got me back a little bit to redox enzymes and looking at gene regulation. And then from there, I went to … by downloading a copy of our 5-Year Strategic Plan, “Beyond Basepairs – A Vision for Integrative and …
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Sequencing Technologies
The Sequencing Technologies Group applies cutting edge molecular … sequencing to enable biological discovery by the JGI and external DOE users. Adopting the latest  sequencing technologies has allowed the JGI to increase sequencing output while significantly …
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FICUS
The Facilities Integrating Collaborations for User Science (FICUS) call … at least two of the facilities, and generate datasets beyond what each of these facilities could generate by … be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. …
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Natural Prodcast Episode 12: Nadine Ziemert
… setup– and yours, too, Dan. DAN UDWARY: Yeah, you’re looking very professional. ALISON TAKEMURA: Thank you. You, … to get into first, and the standing trees. And he had this whole idea of NaPDoS , this computer program which uses … was fascinating, I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE …
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge … … Diversification of the microbial product catalog : Beyond minimal draft and improved draft microbial genomes the program offers single-cell sequencing, …
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Products
The JGI has diverse capabilities in: DNA and RNA sequencing, … on project Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( … and quality of finished product depend on genome. Selected genomes will be improved based on feasibility and scientific …
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Fungal & Algal Program
… to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … an international research team in collaboration with the JGI. Conserved Fungal Genes of Unknown Function offer a …
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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of … in synthetic biology by synthesizing genes, pathways, and whole chromosomes for bioenergy and bioproduct applications. … analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated …
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Synthesis
The Joint Genome Institute's DNA Synthesis Platform capabilities … This is done by synthesizing genes, pathways, and whole chromosomes for bioenergy, nutrient cycling and … assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables users to validate …
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Special Initiatives & Programs
Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for … and is exploring microbial-based synthesis of fuels beyond ethanol. … The JGI Visiting Scientist Program is for …
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Natural Prodcast Episode 22: Alison Narayan
… niche in chemical enzymology. So, we talked about her JGI DNA synthesis project to explore the chemical … every different reaction that you want to do. If you’re not looking to develop a commercial process, you can have the … sure. JACKIE WINTER: I mean. ALISON NARAYAN: Yeah, this is beyond my expertise and being able to predict which enzymes …
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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the … data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The … interpretation of microbiome omics data Developing forward-looking strategies for the deployment of computational …
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