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Genetic Bases of Fungal White Rot Wood Decay Predicted by Phylogenomic Analysis of Correlated Gene-Phenotype Evolution
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… to determine coverage of variants depends on project Fungal Minimal Draft Lower coverage short-read whole genome … sequencing Assembly, annotation ( Mycocosm ) 256/404 Fungal Standard Draft Whole genome shotgun sequencing using … scientific merit Assembly, annotation ( Mycocosm ) 256/404 Fungal Resequencing SNP and short indel calls, rearrangement …
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Natural Prodcast Episode 23: Aaron Puri
… the answer would be that there’s actually a great deal of diversity within these methanotrophs for example, that are … And so it’s really important because that structural diversity it encodes for communication specificity. So it’s … AARON PURI: Yeah. Right. And that’s you’ll find me in the woods then. [LAUGHTER] JACKIE: So we’re kind of across — …
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Natural Prodcast Episode 4: Nancy Keller
… episode is our conversation with Nancy Keller, a fantastic fungal natural products researcher from the University of … that you are the first person we’ve had on to talk about fungal natural products. I can say that I started in fungal natural products – I did my Ph.D. with Craig Townsend …
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Metagenome Program
… elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses several … processes. This research provides insights into microbial diversity and metabolic potential, with implications for … environments, the Program provides a snapshot of microbial diversity and their metabolic functional potential. This …
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Genome sequencing of Rigidoporus microporus provides insights on genes important for wood decay, latex tolerance and interspecific fungal interactions
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Proteome of the Wood Decay Fungus Fomitopsis pinicola Is Altered by Substrate
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Conserved white-rot enzymatic mechanism for wood decay in the Basidiomycota genus Pycnoporus
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a … to identify data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced … Dothideomycetes includes fungi that obtain nutrients from decaying organic matter (saprobes), and many plant pathogens …
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Fungal Friends or Foes in Plant Roots
… other plant-associated fungi. Their analysis identified fungal gene families that help determine if these fungi act … They play key roles in maintaining the plant’s health and diversity, which can in turn boost yields for both food and … partnerships. To learn more about these other plant-fungal relationships, an international team led by graduate …
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Viral Genomics Group
… and computational exploration of uncultivated viral diversity, characterization of molecular mechanisms involved … is still limited. One key challenge is to complement diversity surveys ( Who is there? ) with activity … metatranscriptomics provide invaluable information on virus diversity and activity in microbial communities, however …
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Transcriptomics of Temporal- versus Substrate-Specific Wood Decay in the Brown-Rot Fungus Fibroporia radiculosa
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